Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC16.58■□□□□ 0.24
SHFQ7M4L6 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SHFQ7M4L6 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC16.58■□□□□ 0.24
SHFQ7M4L6 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC16.58■□□□□ 0.24
SHFQ7M4L6 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
SHFQ7M4L6 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
SHFQ7M4L6 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC16.58■□□□□ 0.24
SHFQ7M4L6 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC16.58■□□□□ 0.24
SHFQ7M4L6 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SHFQ7M4L6 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC16.58■□□□□ 0.24
SHFQ7M4L6 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
SHFQ7M4L6 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC16.58■□□□□ 0.24
SHFQ7M4L6 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
SHFQ7M4L6 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
SHFQ7M4L6 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC16.58■□□□□ 0.24
SHFQ7M4L6 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
SHFQ7M4L6 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
SHFQ7M4L6 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
SHFQ7M4L6 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
SHFQ7M4L6 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC16.57■□□□□ 0.24
SHFQ7M4L6 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
SHFQ7M4L6 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SHFQ7M4L6 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
SHFQ7M4L6 PCDHA12-202ENST00000613593 2588 ntBASIC16.57■□□□□ 0.24
SHFQ7M4L6 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SHFQ7M4L6 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SHFQ7M4L6 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SHFQ7M4L6 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC16.57■□□□□ 0.24
SHFQ7M4L6 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SHFQ7M4L6 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SHFQ7M4L6 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SHFQ7M4L6 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SHFQ7M4L6 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC16.57■□□□□ 0.24
SHFQ7M4L6 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SHFQ7M4L6 MYLKP1-201ENST00000509077 1580 ntBASIC16.57■□□□□ 0.24
SHFQ7M4L6 KRT16P1-201ENST00000399124 1418 ntBASIC16.57■□□□□ 0.24
SHFQ7M4L6 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SHFQ7M4L6 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SHFQ7M4L6 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SHFQ7M4L6 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SHFQ7M4L6 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
SHFQ7M4L6 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC16.57■□□□□ 0.24
SHFQ7M4L6 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
SHFQ7M4L6 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC16.57■□□□□ 0.24
SHFQ7M4L6 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC16.57■□□□□ 0.24
SHFQ7M4L6 AC091390.4-202ENST00000476426 537 ntBASIC16.57■□□□□ 0.24
SHFQ7M4L6 RPS2P4-201ENST00000476944 856 ntBASIC16.57■□□□□ 0.24
SHFQ7M4L6 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
SHFQ7M4L6 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC16.57■□□□□ 0.24
SHFQ7M4L6 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC16.57■□□□□ 0.24
SHFQ7M4L6 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
SHFQ7M4L6 AL031985.4-201ENST00000642138 673 ntBASIC16.57■□□□□ 0.24
SHFQ7M4L6 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SHFQ7M4L6 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
SHFQ7M4L6 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SHFQ7M4L6 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC16.57■□□□□ 0.24
SHFQ7M4L6 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC16.57■□□□□ 0.24
SHFQ7M4L6 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SHFQ7M4L6 AC080080.1-201ENST00000625121 2420 ntBASIC16.57■□□□□ 0.24
SHFQ7M4L6 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SHFQ7M4L6 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SHFQ7M4L6 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SHFQ7M4L6 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
SHFQ7M4L6 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SHFQ7M4L6 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SHFQ7M4L6 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SHFQ7M4L6 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SHFQ7M4L6 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
SHFQ7M4L6 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
SHFQ7M4L6 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SHFQ7M4L6 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
SHFQ7M4L6 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC16.56■□□□□ 0.24
SHFQ7M4L6 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SHFQ7M4L6 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SHFQ7M4L6 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SHFQ7M4L6 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SHFQ7M4L6 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SHFQ7M4L6 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
SHFQ7M4L6 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SHFQ7M4L6 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SHFQ7M4L6 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SHFQ7M4L6 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC16.56■□□□□ 0.24
SHFQ7M4L6 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SHFQ7M4L6 AC026271.3-201ENST00000571884 352 ntBASIC16.56■□□□□ 0.24
SHFQ7M4L6 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SHFQ7M4L6 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
SHFQ7M4L6 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC16.56■□□□□ 0.24
SHFQ7M4L6 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC16.56■□□□□ 0.24
SHFQ7M4L6 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
SHFQ7M4L6 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
SHFQ7M4L6 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SHFQ7M4L6 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SHFQ7M4L6 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC16.56■□□□□ 0.24
SHFQ7M4L6 AC009053.2-201ENST00000563701 2365 ntBASIC16.56■□□□□ 0.24
SHFQ7M4L6 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
SHFQ7M4L6 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SHFQ7M4L6 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC16.55■□□□□ 0.24
SHFQ7M4L6 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SHFQ7M4L6 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SHFQ7M4L6 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC16.55■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms