Protein–RNA interactions for Protein: Q6W3E5

GDPD4, Glycerophosphodiester phosphodiesterase domain-containing protein 4, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDPD4Q6W3E5 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
GDPD4Q6W3E5 NARF-204ENST00000390006 1766 ntTSL 2 BASIC18.34■□□□□ 0.53
GDPD4Q6W3E5 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
GDPD4Q6W3E5 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
GDPD4Q6W3E5 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
GDPD4Q6W3E5 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC18.34■□□□□ 0.53
GDPD4Q6W3E5 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
GDPD4Q6W3E5 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC18.34■□□□□ 0.53
GDPD4Q6W3E5 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
GDPD4Q6W3E5 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC18.33■□□□□ 0.53
GDPD4Q6W3E5 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
GDPD4Q6W3E5 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
GDPD4Q6W3E5 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC18.33■□□□□ 0.53
GDPD4Q6W3E5 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
GDPD4Q6W3E5 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
GDPD4Q6W3E5 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC18.33■□□□□ 0.53
GDPD4Q6W3E5 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
GDPD4Q6W3E5 AL138781.2-201ENST00000617896 1843 ntBASIC18.33■□□□□ 0.53
GDPD4Q6W3E5 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
GDPD4Q6W3E5 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.53
GDPD4Q6W3E5 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
GDPD4Q6W3E5 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC18.33■□□□□ 0.52
GDPD4Q6W3E5 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
GDPD4Q6W3E5 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
GDPD4Q6W3E5 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
GDPD4Q6W3E5 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
GDPD4Q6W3E5 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC18.33■□□□□ 0.52
GDPD4Q6W3E5 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC18.33■□□□□ 0.52
GDPD4Q6W3E5 KRT18P56-201ENST00000507275 550 ntBASIC18.33■□□□□ 0.52
GDPD4Q6W3E5 GUSBP12-201ENST00000513727 720 ntBASIC18.33■□□□□ 0.52
GDPD4Q6W3E5 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC18.33■□□□□ 0.52
GDPD4Q6W3E5 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC18.33■□□□□ 0.52
GDPD4Q6W3E5 AP002414.4-201ENST00000589764 1148 ntBASIC18.33■□□□□ 0.52
GDPD4Q6W3E5 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC18.33■□□□□ 0.52
GDPD4Q6W3E5 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
GDPD4Q6W3E5 USP49-202ENST00000373010 2446 ntTSL 5 BASIC18.33■□□□□ 0.52
GDPD4Q6W3E5 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
GDPD4Q6W3E5 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC18.33■□□□□ 0.52
GDPD4Q6W3E5 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC18.33■□□□□ 0.52
GDPD4Q6W3E5 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
GDPD4Q6W3E5 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC18.32■□□□□ 0.52
GDPD4Q6W3E5 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
GDPD4Q6W3E5 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC18.32■□□□□ 0.52
GDPD4Q6W3E5 AC004408.2-201ENST00000623613 2777 ntBASIC18.32■□□□□ 0.52
GDPD4Q6W3E5 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
GDPD4Q6W3E5 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
GDPD4Q6W3E5 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
GDPD4Q6W3E5 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
GDPD4Q6W3E5 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC18.32■□□□□ 0.52
GDPD4Q6W3E5 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
GDPD4Q6W3E5 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
GDPD4Q6W3E5 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
GDPD4Q6W3E5 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
GDPD4Q6W3E5 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC18.32■□□□□ 0.52
GDPD4Q6W3E5 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC18.32■□□□□ 0.52
GDPD4Q6W3E5 MIR3180-1-201ENST00000580374 94 ntBASIC18.32■□□□□ 0.52
GDPD4Q6W3E5 MIR3180-3-201ENST00000584616 94 ntBASIC18.32■□□□□ 0.52
GDPD4Q6W3E5 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC18.32■□□□□ 0.52
GDPD4Q6W3E5 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
GDPD4Q6W3E5 GXYLT1P4-201ENST00000613576 1192 ntBASIC18.32■□□□□ 0.52
GDPD4Q6W3E5 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
GDPD4Q6W3E5 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
GDPD4Q6W3E5 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
GDPD4Q6W3E5 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
GDPD4Q6W3E5 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
GDPD4Q6W3E5 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
GDPD4Q6W3E5 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
GDPD4Q6W3E5 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC18.31■□□□□ 0.52
GDPD4Q6W3E5 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
GDPD4Q6W3E5 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
GDPD4Q6W3E5 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
GDPD4Q6W3E5 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
GDPD4Q6W3E5 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
GDPD4Q6W3E5 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
GDPD4Q6W3E5 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
GDPD4Q6W3E5 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
GDPD4Q6W3E5 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
GDPD4Q6W3E5 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
GDPD4Q6W3E5 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC18.31■□□□□ 0.52
GDPD4Q6W3E5 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC18.31■□□□□ 0.52
GDPD4Q6W3E5 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
GDPD4Q6W3E5 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
GDPD4Q6W3E5 IL11-204ENST00000590625 1028 ntTSL 2 BASIC18.31■□□□□ 0.52
GDPD4Q6W3E5 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC18.31■□□□□ 0.52
GDPD4Q6W3E5 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
GDPD4Q6W3E5 ESPNP-201ENST00000270691 2015 ntBASIC18.31■□□□□ 0.52
GDPD4Q6W3E5 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
GDPD4Q6W3E5 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC18.31■□□□□ 0.52
GDPD4Q6W3E5 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
GDPD4Q6W3E5 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
GDPD4Q6W3E5 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
GDPD4Q6W3E5 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
GDPD4Q6W3E5 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
GDPD4Q6W3E5 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
GDPD4Q6W3E5 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
GDPD4Q6W3E5 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC18.3■□□□□ 0.52
GDPD4Q6W3E5 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
GDPD4Q6W3E5 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC18.3■□□□□ 0.52
GDPD4Q6W3E5 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
GDPD4Q6W3E5 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms