Protein–RNA interactions for Protein: Q6VY07

PACS1, Phosphofurin acidic cluster sorting protein 1, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1Q6VY07 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
PACS1Q6VY07 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PACS1Q6VY07 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC18.51■□□□□ 0.55
PACS1Q6VY07 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC18.51■□□□□ 0.55
PACS1Q6VY07 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PACS1Q6VY07 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PACS1Q6VY07 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PACS1Q6VY07 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PACS1Q6VY07 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
PACS1Q6VY07 PHB2-202ENST00000440277 996 ntTSL 5 BASIC18.51■□□□□ 0.55
PACS1Q6VY07 GXYLT1P3-201ENST00000453058 1193 ntBASIC18.51■□□□□ 0.55
PACS1Q6VY07 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
PACS1Q6VY07 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC18.51■□□□□ 0.55
PACS1Q6VY07 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PACS1Q6VY07 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC18.51■□□□□ 0.55
PACS1Q6VY07 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
PACS1Q6VY07 MIR3180-5-201ENST00000583743 153 ntBASIC18.51■□□□□ 0.55
PACS1Q6VY07 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PACS1Q6VY07 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
PACS1Q6VY07 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC18.51■□□□□ 0.55
PACS1Q6VY07 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC18.51■□□□□ 0.55
PACS1Q6VY07 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC18.51■□□□□ 0.55
PACS1Q6VY07 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PACS1Q6VY07 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PACS1Q6VY07 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PACS1Q6VY07 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PACS1Q6VY07 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC18.5■□□□□ 0.55
PACS1Q6VY07 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
PACS1Q6VY07 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
PACS1Q6VY07 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PACS1Q6VY07 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC18.5■□□□□ 0.55
PACS1Q6VY07 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PACS1Q6VY07 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PACS1Q6VY07 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
PACS1Q6VY07 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC18.5■□□□□ 0.55
PACS1Q6VY07 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
PACS1Q6VY07 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC18.5■□□□□ 0.55
PACS1Q6VY07 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC18.5■□□□□ 0.55
PACS1Q6VY07 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PACS1Q6VY07 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PACS1Q6VY07 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC18.5■□□□□ 0.55
PACS1Q6VY07 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC18.5■□□□□ 0.55
PACS1Q6VY07 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC18.5■□□□□ 0.55
PACS1Q6VY07 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC18.5■□□□□ 0.55
PACS1Q6VY07 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC18.5■□□□□ 0.55
PACS1Q6VY07 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PACS1Q6VY07 AC073912.3-201ENST00000624414 853 ntBASIC18.5■□□□□ 0.55
PACS1Q6VY07 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PACS1Q6VY07 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
PACS1Q6VY07 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
PACS1Q6VY07 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PACS1Q6VY07 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
PACS1Q6VY07 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PACS1Q6VY07 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PACS1Q6VY07 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PACS1Q6VY07 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PACS1Q6VY07 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PACS1Q6VY07 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC18.49■□□□□ 0.55
PACS1Q6VY07 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
PACS1Q6VY07 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PACS1Q6VY07 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
PACS1Q6VY07 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC18.49■□□□□ 0.55
PACS1Q6VY07 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
PACS1Q6VY07 INGX-201ENST00000359239 846 ntBASIC18.49■□□□□ 0.55
PACS1Q6VY07 AP000593.1-201ENST00000393668 712 ntBASIC18.49■□□□□ 0.55
PACS1Q6VY07 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC18.49■□□□□ 0.55
PACS1Q6VY07 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC18.49■□□□□ 0.55
PACS1Q6VY07 WWOX-216ENST00000569818 525 ntBASIC18.49■□□□□ 0.55
PACS1Q6VY07 AC145285.6-201ENST00000604632 637 ntBASIC18.49■□□□□ 0.55
PACS1Q6VY07 FAM87A-204ENST00000613235 858 ntBASIC18.49■□□□□ 0.55
PACS1Q6VY07 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
PACS1Q6VY07 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC18.49■□□□□ 0.55
PACS1Q6VY07 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PACS1Q6VY07 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PACS1Q6VY07 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
PACS1Q6VY07 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC18.49■□□□□ 0.55
PACS1Q6VY07 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
PACS1Q6VY07 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PACS1Q6VY07 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC18.49■□□□□ 0.55
PACS1Q6VY07 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PACS1Q6VY07 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PACS1Q6VY07 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
PACS1Q6VY07 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC18.49■□□□□ 0.55
PACS1Q6VY07 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
PACS1Q6VY07 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
PACS1Q6VY07 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC18.48■□□□□ 0.55
PACS1Q6VY07 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC18.48■□□□□ 0.55
PACS1Q6VY07 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC18.48■□□□□ 0.55
PACS1Q6VY07 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PACS1Q6VY07 LINC01568-207ENST00000641790 1380 ntBASIC18.48■□□□□ 0.55
PACS1Q6VY07 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PACS1Q6VY07 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
PACS1Q6VY07 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
PACS1Q6VY07 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PACS1Q6VY07 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC18.48■□□□□ 0.55
PACS1Q6VY07 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC18.48■□□□□ 0.55
PACS1Q6VY07 SLC25A6P5-201ENST00000435663 894 ntBASIC18.48■□□□□ 0.55
PACS1Q6VY07 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC18.48■□□□□ 0.55
PACS1Q6VY07 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
PACS1Q6VY07 RPS20-210ENST00000523936 899 ntTSL 2 BASIC18.48■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms