Protein–RNA interactions for Protein: Q6NX49

ZNF544, Zinc finger protein 544, humanhuman

Predictions only

Length 715 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF544Q6NX49 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ZNF544Q6NX49 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ZNF544Q6NX49 EIF4G3-212ENST00000602326 6196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
ZNF544Q6NX49 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC16.85■□□□□ 0.29
ZNF544Q6NX49 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
ZNF544Q6NX49 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC16.85■□□□□ 0.29
ZNF544Q6NX49 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC16.85■□□□□ 0.29
ZNF544Q6NX49 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC16.84■□□□□ 0.29
ZNF544Q6NX49 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
ZNF544Q6NX49 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
ZNF544Q6NX49 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ZNF544Q6NX49 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC16.84■□□□□ 0.29
ZNF544Q6NX49 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
ZNF544Q6NX49 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
ZNF544Q6NX49 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC16.84■□□□□ 0.29
ZNF544Q6NX49 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC16.84■□□□□ 0.29
ZNF544Q6NX49 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
ZNF544Q6NX49 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ZNF544Q6NX49 AC087499.1-201ENST00000418141 1075 ntBASIC16.84■□□□□ 0.29
ZNF544Q6NX49 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC16.84■□□□□ 0.29
ZNF544Q6NX49 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC16.84■□□□□ 0.29
ZNF544Q6NX49 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC16.84■□□□□ 0.29
ZNF544Q6NX49 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC16.84■□□□□ 0.29
ZNF544Q6NX49 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
ZNF544Q6NX49 CR392000.1-201ENST00000624770 1228 ntBASIC16.84■□□□□ 0.29
ZNF544Q6NX49 PCDHA12-202ENST00000613593 2588 ntBASIC16.84■□□□□ 0.29
ZNF544Q6NX49 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
ZNF544Q6NX49 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ZNF544Q6NX49 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC16.84■□□□□ 0.29
ZNF544Q6NX49 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ZNF544Q6NX49 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ZNF544Q6NX49 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC16.84■□□□□ 0.29
ZNF544Q6NX49 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
ZNF544Q6NX49 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
ZNF544Q6NX49 SDHAP1-207ENST00000440850 2000 ntBASIC16.84■□□□□ 0.29
ZNF544Q6NX49 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
ZNF544Q6NX49 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC16.84■□□□□ 0.29
ZNF544Q6NX49 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
ZNF544Q6NX49 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
ZNF544Q6NX49 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC16.83■□□□□ 0.29
ZNF544Q6NX49 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
ZNF544Q6NX49 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
ZNF544Q6NX49 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
ZNF544Q6NX49 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ZNF544Q6NX49 UNC93B2-201ENST00000285383 730 ntBASIC16.83■□□□□ 0.28
ZNF544Q6NX49 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
ZNF544Q6NX49 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC16.83■□□□□ 0.28
ZNF544Q6NX49 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ZNF544Q6NX49 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
ZNF544Q6NX49 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
ZNF544Q6NX49 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC16.83■□□□□ 0.28
ZNF544Q6NX49 UBQLN4P1-201ENST00000461599 1801 ntBASIC16.83■□□□□ 0.28
ZNF544Q6NX49 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC16.83■□□□□ 0.28
ZNF544Q6NX49 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
ZNF544Q6NX49 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
ZNF544Q6NX49 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC16.83■□□□□ 0.28
ZNF544Q6NX49 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ZNF544Q6NX49 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ZNF544Q6NX49 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
ZNF544Q6NX49 AL445675.2-201ENST00000620291 557 ntBASIC16.83■□□□□ 0.28
ZNF544Q6NX49 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
ZNF544Q6NX49 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC16.83■□□□□ 0.28
ZNF544Q6NX49 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
ZNF544Q6NX49 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
ZNF544Q6NX49 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ZNF544Q6NX49 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
ZNF544Q6NX49 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ZNF544Q6NX49 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC16.82■□□□□ 0.28
ZNF544Q6NX49 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ZNF544Q6NX49 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ZNF544Q6NX49 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
ZNF544Q6NX49 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC16.82■□□□□ 0.28
ZNF544Q6NX49 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ZNF544Q6NX49 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC16.82■□□□□ 0.28
ZNF544Q6NX49 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC16.82■□□□□ 0.28
ZNF544Q6NX49 PLCB1-201ENST00000338037 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ZNF544Q6NX49 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC16.82■□□□□ 0.28
ZNF544Q6NX49 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ZNF544Q6NX49 FEM1AP3-201ENST00000403722 1741 ntBASIC16.82■□□□□ 0.28
ZNF544Q6NX49 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC16.82■□□□□ 0.28
ZNF544Q6NX49 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC16.82■□□□□ 0.28
ZNF544Q6NX49 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ZNF544Q6NX49 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
ZNF544Q6NX49 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ZNF544Q6NX49 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ZNF544Q6NX49 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC16.82■□□□□ 0.28
ZNF544Q6NX49 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
ZNF544Q6NX49 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC16.82■□□□□ 0.28
ZNF544Q6NX49 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
ZNF544Q6NX49 MMP23A-201ENST00000234610 1017 ntBASIC16.82■□□□□ 0.28
ZNF544Q6NX49 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
ZNF544Q6NX49 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ZNF544Q6NX49 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
ZNF544Q6NX49 TSPY15P-201ENST00000457163 923 ntBASIC16.82■□□□□ 0.28
ZNF544Q6NX49 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ZNF544Q6NX49 AC026271.3-201ENST00000571884 352 ntBASIC16.82■□□□□ 0.28
ZNF544Q6NX49 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ZNF544Q6NX49 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC16.82■□□□□ 0.28
ZNF544Q6NX49 AC133561.5-201ENST00000635547 218 ntBASIC16.82■□□□□ 0.28
ZNF544Q6NX49 AL031985.4-201ENST00000642138 673 ntBASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms