Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
RFX7Q2KHR2 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
RFX7Q2KHR2 KRT89P-201ENST00000620027 1478 ntBASIC22.11■■□□□ 1.13
RFX7Q2KHR2 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
RFX7Q2KHR2 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
RFX7Q2KHR2 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC22.11■■□□□ 1.13
RFX7Q2KHR2 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
RFX7Q2KHR2 AC026396.1-201ENST00000419388 421 ntBASIC22.11■■□□□ 1.13
RFX7Q2KHR2 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
RFX7Q2KHR2 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC22.11■■□□□ 1.13
RFX7Q2KHR2 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC22.11■■□□□ 1.13
RFX7Q2KHR2 AC008687.5-201ENST00000593746 558 ntBASIC22.11■■□□□ 1.13
RFX7Q2KHR2 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC22.1■■□□□ 1.13
RFX7Q2KHR2 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC22.1■■□□□ 1.13
RFX7Q2KHR2 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
RFX7Q2KHR2 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC22.1■■□□□ 1.13
RFX7Q2KHR2 Z83836.1-201ENST00000624605 1642 ntBASIC22.1■■□□□ 1.13
RFX7Q2KHR2 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
RFX7Q2KHR2 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC22.1■■□□□ 1.13
RFX7Q2KHR2 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC22.1■■□□□ 1.13
RFX7Q2KHR2 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC22.1■■□□□ 1.13
RFX7Q2KHR2 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC22.1■■□□□ 1.13
RFX7Q2KHR2 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
RFX7Q2KHR2 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC22.1■■□□□ 1.13
RFX7Q2KHR2 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
RFX7Q2KHR2 KIRREL3-AS3-201ENST00000404882 831 ntBASIC22.1■■□□□ 1.13
RFX7Q2KHR2 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC22.1■■□□□ 1.13
RFX7Q2KHR2 TPM4P1-201ENST00000436100 807 ntBASIC22.1■■□□□ 1.13
RFX7Q2KHR2 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC22.1■■□□□ 1.13
RFX7Q2KHR2 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC22.1■■□□□ 1.13
RFX7Q2KHR2 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC22.1■■□□□ 1.13
RFX7Q2KHR2 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
RFX7Q2KHR2 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC22.1■■□□□ 1.13
RFX7Q2KHR2 AC093010.1-201ENST00000473625 1624 ntBASIC22.1■■□□□ 1.13
RFX7Q2KHR2 LINC01126-201ENST00000623515 1646 ntBASIC22.1■■□□□ 1.13
RFX7Q2KHR2 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC22.1■■□□□ 1.13
RFX7Q2KHR2 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
RFX7Q2KHR2 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
RFX7Q2KHR2 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
RFX7Q2KHR2 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
RFX7Q2KHR2 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC22.09■■□□□ 1.13
RFX7Q2KHR2 POR-209ENST00000439269 1858 ntTSL 2 BASIC22.09■■□□□ 1.13
RFX7Q2KHR2 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
RFX7Q2KHR2 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
RFX7Q2KHR2 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC22.09■■□□□ 1.13
RFX7Q2KHR2 UNC93B7-201ENST00000509439 705 ntBASIC22.09■■□□□ 1.13
RFX7Q2KHR2 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC22.09■■□□□ 1.13
RFX7Q2KHR2 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
RFX7Q2KHR2 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC22.09■■□□□ 1.13
RFX7Q2KHR2 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
RFX7Q2KHR2 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
RFX7Q2KHR2 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
RFX7Q2KHR2 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC22.09■■□□□ 1.13
RFX7Q2KHR2 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC22.08■■□□□ 1.13
RFX7Q2KHR2 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC22.08■■□□□ 1.13
RFX7Q2KHR2 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
RFX7Q2KHR2 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
RFX7Q2KHR2 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC22.08■■□□□ 1.12
RFX7Q2KHR2 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC22.08■■□□□ 1.12
RFX7Q2KHR2 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC22.08■■□□□ 1.12
RFX7Q2KHR2 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC22.08■■□□□ 1.12
RFX7Q2KHR2 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC22.08■■□□□ 1.12
RFX7Q2KHR2 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC22.07■■□□□ 1.12
RFX7Q2KHR2 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC22.07■■□□□ 1.12
RFX7Q2KHR2 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC22.07■■□□□ 1.12
RFX7Q2KHR2 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC22.07■■□□□ 1.12
RFX7Q2KHR2 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC22.07■■□□□ 1.12
RFX7Q2KHR2 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC22.07■■□□□ 1.12
RFX7Q2KHR2 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC22.07■■□□□ 1.12
RFX7Q2KHR2 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC22.07■■□□□ 1.12
RFX7Q2KHR2 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC22.07■■□□□ 1.12
RFX7Q2KHR2 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
RFX7Q2KHR2 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC22.07■■□□□ 1.12
RFX7Q2KHR2 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC22.07■■□□□ 1.12
RFX7Q2KHR2 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
RFX7Q2KHR2 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC22.07■■□□□ 1.12
RFX7Q2KHR2 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
RFX7Q2KHR2 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC22.07■■□□□ 1.12
RFX7Q2KHR2 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC22.07■■□□□ 1.12
RFX7Q2KHR2 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC22.07■■□□□ 1.12
RFX7Q2KHR2 AC246785.2-201ENST00000432512 513 ntBASIC22.07■■□□□ 1.12
RFX7Q2KHR2 AC113404.2-201ENST00000507884 177 ntBASIC22.07■■□□□ 1.12
RFX7Q2KHR2 AC111152.3-201ENST00000569699 673 ntBASIC22.07■■□□□ 1.12
RFX7Q2KHR2 RN7SL510P-201ENST00000581311 263 ntBASIC22.07■■□□□ 1.12
RFX7Q2KHR2 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC22.07■■□□□ 1.12
RFX7Q2KHR2 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC22.07■■□□□ 1.12
RFX7Q2KHR2 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC22.07■■□□□ 1.12
RFX7Q2KHR2 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
RFX7Q2KHR2 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC22.07■■□□□ 1.12
RFX7Q2KHR2 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
RFX7Q2KHR2 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
RFX7Q2KHR2 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC22.07■■□□□ 1.12
RFX7Q2KHR2 COMP-202ENST00000425807 2292 ntTSL 2 BASIC22.07■■□□□ 1.12
RFX7Q2KHR2 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC22.07■■□□□ 1.12
RFX7Q2KHR2 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC22.06■■□□□ 1.12
RFX7Q2KHR2 FLYWCH1P1-201ENST00000460917 1874 ntBASIC22.06■■□□□ 1.12
RFX7Q2KHR2 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC22.06■■□□□ 1.12
RFX7Q2KHR2 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC22.06■■□□□ 1.12
RFX7Q2KHR2 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
RFX7Q2KHR2 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms