Protein–RNA interactions for Protein: Q12766

HMGXB3, HMG domain-containing protein 3, humanhuman

Predictions only

Length 1,538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3Q12766 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC32.05■■■□□ 2.72
HMGXB3Q12766 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC32.05■■■□□ 2.72
HMGXB3Q12766 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC32.05■■■□□ 2.72
HMGXB3Q12766 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC32.05■■■□□ 2.72
HMGXB3Q12766 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC32.05■■■□□ 2.72
HMGXB3Q12766 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC32.05■■■□□ 2.72
HMGXB3Q12766 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC32.05■■■□□ 2.72
HMGXB3Q12766 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC32.05■■■□□ 2.72
HMGXB3Q12766 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC32.05■■■□□ 2.72
HMGXB3Q12766 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC32.05■■■□□ 2.72
HMGXB3Q12766 PRYP5-201ENST00000451909 266 ntBASIC32.05■■■□□ 2.72
HMGXB3Q12766 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC32.05■■■□□ 2.72
HMGXB3Q12766 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC32.05■■■□□ 2.72
HMGXB3Q12766 AC093028.1-201ENST00000622998 982 ntBASIC32.05■■■□□ 2.72
HMGXB3Q12766 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC32.05■■■□□ 2.72
HMGXB3Q12766 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC32.04■■■□□ 2.72
HMGXB3Q12766 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC32.04■■■□□ 2.72
HMGXB3Q12766 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC32.04■■■□□ 2.72
HMGXB3Q12766 SLC4A1APP2-201ENST00000424054 1259 ntBASIC32.04■■■□□ 2.72
HMGXB3Q12766 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC32.04■■■□□ 2.72
HMGXB3Q12766 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC32.04■■■□□ 2.72
HMGXB3Q12766 GPR89P-201ENST00000407924 1495 ntBASIC32.04■■■□□ 2.72
HMGXB3Q12766 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC32.04■■■□□ 2.72
HMGXB3Q12766 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC32.04■■■□□ 2.72
HMGXB3Q12766 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC32.04■■■□□ 2.72
HMGXB3Q12766 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC32.04■■■□□ 2.72
HMGXB3Q12766 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC32.03■■■□□ 2.72
HMGXB3Q12766 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC32.03■■■□□ 2.72
HMGXB3Q12766 LINC00602-201ENST00000629776 2065 ntBASIC32.03■■■□□ 2.72
HMGXB3Q12766 MED29-202ENST00000594368 1471 ntTSL 2 BASIC32.03■■■□□ 2.72
HMGXB3Q12766 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC32.03■■■□□ 2.72
HMGXB3Q12766 PRSS29P-201ENST00000440800 595 ntBASIC32.03■■■□□ 2.72
HMGXB3Q12766 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC32.03■■■□□ 2.72
HMGXB3Q12766 PDPK2P-202ENST00000562415 1191 ntBASIC32.03■■■□□ 2.72
HMGXB3Q12766 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC32.03■■■□□ 2.72
HMGXB3Q12766 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC32.03■■■□□ 2.72
HMGXB3Q12766 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC32.03■■■□□ 2.72
HMGXB3Q12766 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC32.03■■■□□ 2.72
HMGXB3Q12766 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC32.03■■■□□ 2.72
HMGXB3Q12766 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC32.03■■■□□ 2.72
HMGXB3Q12766 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC32.03■■■□□ 2.72
HMGXB3Q12766 GOLGA6L17P-202ENST00000614358 1398 ntBASIC32.03■■■□□ 2.72
HMGXB3Q12766 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC32.02■■■□□ 2.72
HMGXB3Q12766 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC32.02■■■□□ 2.72
HMGXB3Q12766 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC32.02■■■□□ 2.72
HMGXB3Q12766 STOM-202ENST00000347359 870 ntTSL 2 BASIC32.02■■■□□ 2.72
HMGXB3Q12766 IGLL3P-201ENST00000412472 434 ntBASIC32.02■■■□□ 2.72
HMGXB3Q12766 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC32.02■■■□□ 2.72
HMGXB3Q12766 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC32.02■■■□□ 2.72
HMGXB3Q12766 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC32.02■■■□□ 2.72
HMGXB3Q12766 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC32.02■■■□□ 2.72
HMGXB3Q12766 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC32.02■■■□□ 2.72
HMGXB3Q12766 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC32.02■■■□□ 2.72
HMGXB3Q12766 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC32.02■■■□□ 2.72
HMGXB3Q12766 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC32.02■■■□□ 2.72
HMGXB3Q12766 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC32.02■■■□□ 2.72
HMGXB3Q12766 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC32.02■■■□□ 2.72
HMGXB3Q12766 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC32.02■■■□□ 2.72
HMGXB3Q12766 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC32.02■■■□□ 2.72
HMGXB3Q12766 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC32.02■■■□□ 2.72
HMGXB3Q12766 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC32.02■■■□□ 2.72
HMGXB3Q12766 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC32.02■■■□□ 2.72
HMGXB3Q12766 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC32.02■■■□□ 2.72
HMGXB3Q12766 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC32.01■■■□□ 2.72
HMGXB3Q12766 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC32.01■■■□□ 2.72
HMGXB3Q12766 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC32.01■■■□□ 2.72
HMGXB3Q12766 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC32.01■■■□□ 2.72
HMGXB3Q12766 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC32.01■■■□□ 2.72
HMGXB3Q12766 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC32.01■■■□□ 2.72
HMGXB3Q12766 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC32.01■■■□□ 2.72
HMGXB3Q12766 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC32.01■■■□□ 2.72
HMGXB3Q12766 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC32.01■■■□□ 2.72
HMGXB3Q12766 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC32.01■■■□□ 2.71
HMGXB3Q12766 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC32.01■■■□□ 2.71
HMGXB3Q12766 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC32.01■■■□□ 2.71
HMGXB3Q12766 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC32.01■■■□□ 2.71
HMGXB3Q12766 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC32.01■■■□□ 2.71
HMGXB3Q12766 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2.71
HMGXB3Q12766 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC32■■■□□ 2.71
HMGXB3Q12766 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2.71
HMGXB3Q12766 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC32■■■□□ 2.71
HMGXB3Q12766 AC125437.2-201ENST00000625180 2167 ntBASIC32■■■□□ 2.71
HMGXB3Q12766 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC32■■■□□ 2.71
HMGXB3Q12766 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC32■■■□□ 2.71
HMGXB3Q12766 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC32■■■□□ 2.71
HMGXB3Q12766 ADM-208ENST00000534464 1640 ntTSL 2 BASIC32■■■□□ 2.71
HMGXB3Q12766 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC32■■■□□ 2.71
HMGXB3Q12766 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC32■■■□□ 2.71
HMGXB3Q12766 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC32■■■□□ 2.71
HMGXB3Q12766 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC32■■■□□ 2.71
HMGXB3Q12766 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC31.99■■■□□ 2.71
HMGXB3Q12766 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC31.99■■■□□ 2.71
HMGXB3Q12766 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC31.99■■■□□ 2.71
HMGXB3Q12766 AL139400.1-201ENST00000366220 510 ntBASIC31.99■■■□□ 2.71
HMGXB3Q12766 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC31.99■■■□□ 2.71
HMGXB3Q12766 AC122714.2-201ENST00000502787 707 ntBASIC31.99■■■□□ 2.71
HMGXB3Q12766 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC31.99■■■□□ 2.71
HMGXB3Q12766 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC31.99■■■□□ 2.71
HMGXB3Q12766 AL589182.2-201ENST00000619332 1049 ntBASIC31.99■■■□□ 2.71
HMGXB3Q12766 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC31.99■■■□□ 2.71
Retrieved 100 of 98,524 protein–RNA pairs in 73.7 ms