Protein–RNA interactions for Protein: P83110

HTRA3, Serine protease HTRA3, humanhuman

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTRA3P83110 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
HTRA3P83110 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC21.15■□□□□ 0.98
HTRA3P83110 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
HTRA3P83110 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC21.15■□□□□ 0.98
HTRA3P83110 MIR943-201ENST00000401286 94 ntBASIC21.15■□□□□ 0.98
HTRA3P83110 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC21.15■□□□□ 0.98
HTRA3P83110 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC21.15■□□□□ 0.98
HTRA3P83110 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC21.15■□□□□ 0.98
HTRA3P83110 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC21.15■□□□□ 0.98
HTRA3P83110 VPS29-207ENST00000549970 818 ntTSL 3 BASIC21.15■□□□□ 0.98
HTRA3P83110 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
HTRA3P83110 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC21.15■□□□□ 0.98
HTRA3P83110 AL391422.3-201ENST00000603791 2761 ntBASIC21.15■□□□□ 0.98
HTRA3P83110 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
HTRA3P83110 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC21.15■□□□□ 0.98
HTRA3P83110 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
HTRA3P83110 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
HTRA3P83110 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
HTRA3P83110 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
HTRA3P83110 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
HTRA3P83110 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC21.14■□□□□ 0.97
HTRA3P83110 AC067863.1-201ENST00000494933 530 ntBASIC21.14■□□□□ 0.97
HTRA3P83110 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
HTRA3P83110 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC21.14■□□□□ 0.97
HTRA3P83110 AL596325.1-201ENST00000563991 1082 ntBASIC21.14■□□□□ 0.97
HTRA3P83110 AC015911.4-201ENST00000588022 1070 ntBASIC21.14■□□□□ 0.97
HTRA3P83110 SRP9-204ENST00000619790 377 ntTSL 2 BASIC21.14■□□□□ 0.97
HTRA3P83110 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC21.14■□□□□ 0.97
HTRA3P83110 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
HTRA3P83110 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
HTRA3P83110 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC21.14■□□□□ 0.97
HTRA3P83110 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC21.14■□□□□ 0.97
HTRA3P83110 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC21.14■□□□□ 0.97
HTRA3P83110 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.97
HTRA3P83110 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC21.14■□□□□ 0.97
HTRA3P83110 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC21.14■□□□□ 0.97
HTRA3P83110 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
HTRA3P83110 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC21.13■□□□□ 0.97
HTRA3P83110 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC21.13■□□□□ 0.97
HTRA3P83110 AC025580.3-201ENST00000617932 1424 ntBASIC21.13■□□□□ 0.97
HTRA3P83110 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC21.13■□□□□ 0.97
HTRA3P83110 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
HTRA3P83110 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
HTRA3P83110 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
HTRA3P83110 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
HTRA3P83110 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC21.13■□□□□ 0.97
HTRA3P83110 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
HTRA3P83110 CTNS-203ENST00000399306 803 ntTSL 3 BASIC21.13■□□□□ 0.97
HTRA3P83110 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
HTRA3P83110 AC074386.1-202ENST00000463561 864 ntBASIC21.13■□□□□ 0.97
HTRA3P83110 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
HTRA3P83110 AC025048.6-201ENST00000634326 1161 ntBASIC21.13■□□□□ 0.97
HTRA3P83110 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
HTRA3P83110 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC21.13■□□□□ 0.97
HTRA3P83110 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
HTRA3P83110 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
HTRA3P83110 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
HTRA3P83110 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC21.13■□□□□ 0.97
HTRA3P83110 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
HTRA3P83110 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
HTRA3P83110 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
HTRA3P83110 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC21.12■□□□□ 0.97
HTRA3P83110 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC21.12■□□□□ 0.97
HTRA3P83110 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
HTRA3P83110 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
HTRA3P83110 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
HTRA3P83110 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
HTRA3P83110 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
HTRA3P83110 NEK7-201ENST00000367383 586 ntTSL 2 BASIC21.12■□□□□ 0.97
HTRA3P83110 COX5BP8-201ENST00000416911 349 ntBASIC21.12■□□□□ 0.97
HTRA3P83110 FAM207CP-201ENST00000443486 507 ntBASIC21.12■□□□□ 0.97
HTRA3P83110 AC113404.2-201ENST00000507884 177 ntBASIC21.12■□□□□ 0.97
HTRA3P83110 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC21.12■□□□□ 0.97
HTRA3P83110 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC21.12■□□□□ 0.97
HTRA3P83110 HFE2-206ENST00000634927 506 ntTSL 4 BASIC21.12■□□□□ 0.97
HTRA3P83110 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
HTRA3P83110 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
HTRA3P83110 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
HTRA3P83110 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
HTRA3P83110 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC21.12■□□□□ 0.97
HTRA3P83110 PC-214ENST00000628663 1470 ntTSL 5 BASIC21.12■□□□□ 0.97
HTRA3P83110 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
HTRA3P83110 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
HTRA3P83110 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
HTRA3P83110 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC21.11■□□□□ 0.97
HTRA3P83110 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
HTRA3P83110 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
HTRA3P83110 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
HTRA3P83110 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC21.11■□□□□ 0.97
HTRA3P83110 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
HTRA3P83110 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC21.11■□□□□ 0.97
HTRA3P83110 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
HTRA3P83110 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC21.11■□□□□ 0.97
HTRA3P83110 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC21.11■□□□□ 0.97
HTRA3P83110 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC21.11■□□□□ 0.97
HTRA3P83110 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
HTRA3P83110 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
HTRA3P83110 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
HTRA3P83110 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
HTRA3P83110 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms