Protein–RNA interactions for Protein: P62701

RPS4X, 40S ribosomal protein S4, X isoform, humanhuman

Known RBP Predictions only

Length 263 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4XP62701 AC005332.8-201ENST00000622750 2735 ntBASIC16.54■□□□□ 0.24
RPS4XP62701 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RPS4XP62701 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RPS4XP62701 PHGDH-209ENST00000641074 1780 ntBASIC16.54■□□□□ 0.24
RPS4XP62701 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
RPS4XP62701 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RPS4XP62701 EML3-217ENST00000531557 2509 ntTSL 5 BASIC16.54■□□□□ 0.24
RPS4XP62701 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC16.54■□□□□ 0.24
RPS4XP62701 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
RPS4XP62701 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC16.54■□□□□ 0.24
RPS4XP62701 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
RPS4XP62701 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
RPS4XP62701 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
RPS4XP62701 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC16.54■□□□□ 0.24
RPS4XP62701 KRT18P23-201ENST00000435622 1283 ntBASIC16.54■□□□□ 0.24
RPS4XP62701 LTBR-211ENST00000543190 785 ntTSL 3 BASIC16.54■□□□□ 0.24
RPS4XP62701 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RPS4XP62701 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RPS4XP62701 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC16.54■□□□□ 0.24
RPS4XP62701 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RPS4XP62701 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
RPS4XP62701 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RPS4XP62701 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RPS4XP62701 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC16.54■□□□□ 0.24
RPS4XP62701 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RPS4XP62701 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC16.54■□□□□ 0.24
RPS4XP62701 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RPS4XP62701 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC16.54■□□□□ 0.24
RPS4XP62701 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RPS4XP62701 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RPS4XP62701 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RPS4XP62701 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
RPS4XP62701 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
RPS4XP62701 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RPS4XP62701 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RPS4XP62701 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RPS4XP62701 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC16.53■□□□□ 0.24
RPS4XP62701 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC16.53■□□□□ 0.24
RPS4XP62701 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
RPS4XP62701 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RPS4XP62701 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC16.53■□□□□ 0.24
RPS4XP62701 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
RPS4XP62701 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC16.53■□□□□ 0.24
RPS4XP62701 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RPS4XP62701 AC007663.1-201ENST00000438948 1240 ntBASIC16.53■□□□□ 0.24
RPS4XP62701 PHB2-202ENST00000440277 996 ntTSL 5 BASIC16.53■□□□□ 0.24
RPS4XP62701 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
RPS4XP62701 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RPS4XP62701 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RPS4XP62701 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC16.53■□□□□ 0.24
RPS4XP62701 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RPS4XP62701 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC16.53■□□□□ 0.24
RPS4XP62701 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RPS4XP62701 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC16.53■□□□□ 0.24
RPS4XP62701 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC16.53■□□□□ 0.24
RPS4XP62701 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RPS4XP62701 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RPS4XP62701 AC067852.2-201ENST00000590513 2313 ntBASIC16.53■□□□□ 0.24
RPS4XP62701 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
RPS4XP62701 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RPS4XP62701 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RPS4XP62701 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RPS4XP62701 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC16.53■□□□□ 0.24
RPS4XP62701 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
RPS4XP62701 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
RPS4XP62701 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RPS4XP62701 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC16.52■□□□□ 0.24
RPS4XP62701 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC16.52■□□□□ 0.24
RPS4XP62701 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RPS4XP62701 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC16.52■□□□□ 0.24
RPS4XP62701 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC16.52■□□□□ 0.24
RPS4XP62701 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC16.52■□□□□ 0.24
RPS4XP62701 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RPS4XP62701 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RPS4XP62701 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC16.52■□□□□ 0.24
RPS4XP62701 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC16.52■□□□□ 0.24
RPS4XP62701 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
RPS4XP62701 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
RPS4XP62701 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC16.52■□□□□ 0.24
RPS4XP62701 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC16.52■□□□□ 0.24
RPS4XP62701 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC16.52■□□□□ 0.24
RPS4XP62701 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC16.52■□□□□ 0.24
RPS4XP62701 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
RPS4XP62701 AC010653.2-201ENST00000623505 997 ntBASIC16.52■□□□□ 0.24
RPS4XP62701 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
RPS4XP62701 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
RPS4XP62701 PCDHB18P-201ENST00000524813 2368 ntBASIC16.52■□□□□ 0.23
RPS4XP62701 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC16.52■□□□□ 0.23
RPS4XP62701 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
RPS4XP62701 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
RPS4XP62701 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
RPS4XP62701 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
RPS4XP62701 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
RPS4XP62701 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
RPS4XP62701 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
RPS4XP62701 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC16.52■□□□□ 0.23
RPS4XP62701 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
RPS4XP62701 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
RPS4XP62701 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
RPS4XP62701 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms