Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLDN20P56880 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLDN20P56880 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLDN20P56880 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
CLDN20P56880 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLDN20P56880 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLDN20P56880 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLDN20P56880 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC16.8■□□□□ 0.28
CLDN20P56880 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
CLDN20P56880 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLDN20P56880 AP000523.1-201ENST00000398242 1049 ntBASIC16.8■□□□□ 0.28
CLDN20P56880 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC16.8■□□□□ 0.28
CLDN20P56880 TSPY5P-201ENST00000426936 936 ntBASIC16.8■□□□□ 0.28
CLDN20P56880 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC16.8■□□□□ 0.28
CLDN20P56880 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CLDN20P56880 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC16.8■□□□□ 0.28
CLDN20P56880 ETFA-216ENST00000560726 942 ntTSL 3 BASIC16.8■□□□□ 0.28
CLDN20P56880 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC16.8■□□□□ 0.28
CLDN20P56880 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC16.8■□□□□ 0.28
CLDN20P56880 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CLDN20P56880 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
CLDN20P56880 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC16.8■□□□□ 0.28
CLDN20P56880 AC083906.6-201ENST00000641366 219 ntBASIC16.8■□□□□ 0.28
CLDN20P56880 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLDN20P56880 NFYC-AS1-201ENST00000606277 1687 ntBASIC16.8■□□□□ 0.28
CLDN20P56880 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLDN20P56880 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC16.8■□□□□ 0.28
CLDN20P56880 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLDN20P56880 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC16.8■□□□□ 0.28
CLDN20P56880 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLDN20P56880 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
CLDN20P56880 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLDN20P56880 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
CLDN20P56880 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLDN20P56880 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CLDN20P56880 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC16.79■□□□□ 0.28
CLDN20P56880 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC16.79■□□□□ 0.28
CLDN20P56880 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC16.79■□□□□ 0.28
CLDN20P56880 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC16.79■□□□□ 0.28
CLDN20P56880 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC16.79■□□□□ 0.28
CLDN20P56880 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CLDN20P56880 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC16.79■□□□□ 0.28
CLDN20P56880 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC16.79■□□□□ 0.28
CLDN20P56880 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CLDN20P56880 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLDN20P56880 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CLDN20P56880 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLDN20P56880 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLDN20P56880 MIR564-202ENST00000385049 94 ntBASIC16.79■□□□□ 0.28
CLDN20P56880 AC063952.2-201ENST00000498792 1227 ntBASIC16.79■□□□□ 0.28
CLDN20P56880 GCSHP2-201ENST00000560971 527 ntBASIC16.79■□□□□ 0.28
CLDN20P56880 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLDN20P56880 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CLDN20P56880 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLDN20P56880 AC012313.1-201ENST00000593393 3059 ntBASIC16.79■□□□□ 0.28
CLDN20P56880 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLDN20P56880 MTMR9LP-203ENST00000426597 1545 ntBASIC16.79■□□□□ 0.28
CLDN20P56880 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLDN20P56880 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC16.79■□□□□ 0.28
CLDN20P56880 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLDN20P56880 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC16.79■□□□□ 0.28
CLDN20P56880 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLDN20P56880 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC16.79■□□□□ 0.28
CLDN20P56880 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC16.79■□□□□ 0.28
CLDN20P56880 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC16.79■□□□□ 0.28
CLDN20P56880 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLDN20P56880 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLDN20P56880 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC16.79■□□□□ 0.28
CLDN20P56880 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CLDN20P56880 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CLDN20P56880 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLDN20P56880 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLDN20P56880 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CLDN20P56880 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLDN20P56880 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLDN20P56880 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
CLDN20P56880 AC093525.10-201ENST00000625130 1569 ntBASIC16.78■□□□□ 0.28
CLDN20P56880 AL357033.4-201ENST00000617703 1807 ntBASIC16.78■□□□□ 0.28
CLDN20P56880 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
CLDN20P56880 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
CLDN20P56880 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
CLDN20P56880 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLDN20P56880 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLDN20P56880 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLDN20P56880 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
CLDN20P56880 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
CLDN20P56880 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
CLDN20P56880 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLDN20P56880 ELP6-205ENST00000439305 880 ntTSL 2 BASIC16.78■□□□□ 0.28
CLDN20P56880 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC16.78■□□□□ 0.28
CLDN20P56880 AC022616.7-201ENST00000525383 220 ntBASIC16.78■□□□□ 0.28
CLDN20P56880 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC16.78■□□□□ 0.28
CLDN20P56880 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC16.78■□□□□ 0.28
CLDN20P56880 NME3-204ENST00000563498 920 ntTSL 2 BASIC16.78■□□□□ 0.28
CLDN20P56880 AC024243.1-201ENST00000609234 778 ntBASIC16.78■□□□□ 0.28
CLDN20P56880 AL590326.2-201ENST00000625139 305 ntBASIC16.78■□□□□ 0.28
CLDN20P56880 Z98044.1-201ENST00000632503 1764 ntBASIC16.78■□□□□ 0.28
CLDN20P56880 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
CLDN20P56880 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
CLDN20P56880 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms