Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC17.1■□□□□ 0.33
CDH12P55289 CD177P1-201ENST00000606252 935 ntBASIC17.1■□□□□ 0.33
CDH12P55289 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDH12P55289 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDH12P55289 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CDH12P55289 AL135905.2-201ENST00000584934 1404 ntBASIC17.1■□□□□ 0.33
CDH12P55289 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CDH12P55289 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDH12P55289 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC17.09■□□□□ 0.33
CDH12P55289 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDH12P55289 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDH12P55289 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CDH12P55289 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CDH12P55289 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CDH12P55289 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC17.09■□□□□ 0.33
CDH12P55289 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDH12P55289 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDH12P55289 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC17.09■□□□□ 0.33
CDH12P55289 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDH12P55289 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDH12P55289 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDH12P55289 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDH12P55289 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CDH12P55289 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
CDH12P55289 AC098590.1-201ENST00000468126 897 ntBASIC17.09■□□□□ 0.33
CDH12P55289 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC17.09■□□□□ 0.33
CDH12P55289 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CDH12P55289 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC17.09■□□□□ 0.33
CDH12P55289 SRI-203ENST00000419179 1307 ntTSL 2 BASIC17.09■□□□□ 0.33
CDH12P55289 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC17.09■□□□□ 0.33
CDH12P55289 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
CDH12P55289 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC17.09■□□□□ 0.33
CDH12P55289 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CDH12P55289 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
CDH12P55289 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CDH12P55289 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDH12P55289 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDH12P55289 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDH12P55289 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDH12P55289 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CDH12P55289 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
CDH12P55289 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC17.08■□□□□ 0.33
CDH12P55289 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
CDH12P55289 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC17.08■□□□□ 0.33
CDH12P55289 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC17.08■□□□□ 0.33
CDH12P55289 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CDH12P55289 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC17.08■□□□□ 0.32
CDH12P55289 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CDH12P55289 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC17.08■□□□□ 0.32
CDH12P55289 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
CDH12P55289 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
CDH12P55289 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CDH12P55289 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC17.08■□□□□ 0.32
CDH12P55289 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
CDH12P55289 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC17.08■□□□□ 0.32
CDH12P55289 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CDH12P55289 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC17.08■□□□□ 0.32
CDH12P55289 AP000692.2-201ENST00000608391 879 ntBASIC17.08■□□□□ 0.32
CDH12P55289 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CDH12P55289 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
CDH12P55289 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CDH12P55289 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC17.08■□□□□ 0.32
CDH12P55289 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CDH12P55289 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CDH12P55289 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CDH12P55289 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC17.08■□□□□ 0.32
CDH12P55289 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.32
CDH12P55289 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CDH12P55289 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.32
CDH12P55289 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
CDH12P55289 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC17.08■□□□□ 0.32
CDH12P55289 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC17.08■□□□□ 0.32
CDH12P55289 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
CDH12P55289 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CDH12P55289 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDH12P55289 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDH12P55289 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC17.07■□□□□ 0.32
CDH12P55289 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC17.07■□□□□ 0.32
CDH12P55289 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDH12P55289 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDH12P55289 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDH12P55289 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDH12P55289 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC17.07■□□□□ 0.32
CDH12P55289 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC17.07■□□□□ 0.32
CDH12P55289 SLC25A6P5-201ENST00000435663 894 ntBASIC17.07■□□□□ 0.32
CDH12P55289 AL158047.1-201ENST00000445918 881 ntBASIC17.07■□□□□ 0.32
CDH12P55289 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC17.07■□□□□ 0.32
CDH12P55289 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
CDH12P55289 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC17.07■□□□□ 0.32
CDH12P55289 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC17.07■□□□□ 0.32
CDH12P55289 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CDH12P55289 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC17.07■□□□□ 0.32
CDH12P55289 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CDH12P55289 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDH12P55289 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC17.07■□□□□ 0.32
CDH12P55289 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CDH12P55289 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC17.07■□□□□ 0.32
CDH12P55289 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC17.07■□□□□ 0.32
CDH12P55289 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC17.07■□□□□ 0.32
CDH12P55289 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms