Protein–RNA interactions for Protein: P55160

NCKAP1L, Nck-associated protein 1-like, humanhuman

Predictions only

Length 1,127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1LP55160 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC20.03■□□□□ 0.8
NCKAP1LP55160 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC20.03■□□□□ 0.8
NCKAP1LP55160 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
NCKAP1LP55160 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NCKAP1LP55160 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
NCKAP1LP55160 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC20.03■□□□□ 0.8
NCKAP1LP55160 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC20.03■□□□□ 0.8
NCKAP1LP55160 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
NCKAP1LP55160 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC20.03■□□□□ 0.8
NCKAP1LP55160 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
NCKAP1LP55160 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NCKAP1LP55160 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC20.03■□□□□ 0.8
NCKAP1LP55160 FXN-203ENST00000396366 922 ntTSL 2 BASIC20.03■□□□□ 0.8
NCKAP1LP55160 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC20.03■□□□□ 0.8
NCKAP1LP55160 PCED1CP-201ENST00000419887 785 ntBASIC20.03■□□□□ 0.8
NCKAP1LP55160 DBP-204ENST00000599385 709 ntTSL 3 BASIC20.03■□□□□ 0.8
NCKAP1LP55160 NDUFV2-AS1-203ENST00000608008 779 ntBASIC20.03■□□□□ 0.8
NCKAP1LP55160 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC20.03■□□□□ 0.8
NCKAP1LP55160 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
NCKAP1LP55160 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
NCKAP1LP55160 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC20.03■□□□□ 0.8
NCKAP1LP55160 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
NCKAP1LP55160 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC20.03■□□□□ 0.8
NCKAP1LP55160 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NCKAP1LP55160 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
NCKAP1LP55160 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
NCKAP1LP55160 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
NCKAP1LP55160 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
NCKAP1LP55160 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
NCKAP1LP55160 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC20.02■□□□□ 0.8
NCKAP1LP55160 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
NCKAP1LP55160 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
NCKAP1LP55160 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
NCKAP1LP55160 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
NCKAP1LP55160 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC20.02■□□□□ 0.8
NCKAP1LP55160 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
NCKAP1LP55160 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
NCKAP1LP55160 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC20.02■□□□□ 0.8
NCKAP1LP55160 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
NCKAP1LP55160 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC20.02■□□□□ 0.8
NCKAP1LP55160 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
NCKAP1LP55160 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
NCKAP1LP55160 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
NCKAP1LP55160 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC20.02■□□□□ 0.8
NCKAP1LP55160 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC20.02■□□□□ 0.8
NCKAP1LP55160 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC20.02■□□□□ 0.8
NCKAP1LP55160 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
NCKAP1LP55160 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC20.02■□□□□ 0.8
NCKAP1LP55160 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
NCKAP1LP55160 AL390719.2-201ENST00000606993 987 ntBASIC20.02■□□□□ 0.8
NCKAP1LP55160 POR-209ENST00000439269 1858 ntTSL 2 BASIC20.02■□□□□ 0.8
NCKAP1LP55160 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
NCKAP1LP55160 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC20.02■□□□□ 0.79
NCKAP1LP55160 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
NCKAP1LP55160 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
NCKAP1LP55160 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.79
NCKAP1LP55160 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
NCKAP1LP55160 AC093010.1-201ENST00000473625 1624 ntBASIC20.02■□□□□ 0.79
NCKAP1LP55160 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC20.02■□□□□ 0.79
NCKAP1LP55160 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
NCKAP1LP55160 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
NCKAP1LP55160 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
NCKAP1LP55160 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC20.01■□□□□ 0.79
NCKAP1LP55160 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
NCKAP1LP55160 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
NCKAP1LP55160 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC20.01■□□□□ 0.79
NCKAP1LP55160 PPOX-214ENST00000535223 664 ntTSL 3 BASIC20.01■□□□□ 0.79
NCKAP1LP55160 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC20.01■□□□□ 0.79
NCKAP1LP55160 AC005332.3-201ENST00000589904 676 ntBASIC20.01■□□□□ 0.79
NCKAP1LP55160 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC20.01■□□□□ 0.79
NCKAP1LP55160 GPR32P1-201ENST00000601788 811 ntBASIC20.01■□□□□ 0.79
NCKAP1LP55160 AL358472.4-201ENST00000633140 710 ntBASIC20.01■□□□□ 0.79
NCKAP1LP55160 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
NCKAP1LP55160 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
NCKAP1LP55160 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
NCKAP1LP55160 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
NCKAP1LP55160 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
NCKAP1LP55160 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
NCKAP1LP55160 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
NCKAP1LP55160 LINC00167-201ENST00000530583 1419 ntBASIC20.01■□□□□ 0.79
NCKAP1LP55160 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC20.01■□□□□ 0.79
NCKAP1LP55160 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
NCKAP1LP55160 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
NCKAP1LP55160 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
NCKAP1LP55160 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
NCKAP1LP55160 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC20■□□□□ 0.79
NCKAP1LP55160 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
NCKAP1LP55160 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
NCKAP1LP55160 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
NCKAP1LP55160 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
NCKAP1LP55160 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
NCKAP1LP55160 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
NCKAP1LP55160 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
NCKAP1LP55160 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
NCKAP1LP55160 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC20■□□□□ 0.79
NCKAP1LP55160 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC20■□□□□ 0.79
NCKAP1LP55160 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC20■□□□□ 0.79
NCKAP1LP55160 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC20■□□□□ 0.79
NCKAP1LP55160 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC20■□□□□ 0.79
NCKAP1LP55160 AC004263.2-201ENST00000617183 678 ntBASIC20■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms