Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
LIMK1P53667 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC18.08■□□□□ 0.48
LIMK1P53667 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC18.08■□□□□ 0.48
LIMK1P53667 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
LIMK1P53667 MIR3687-2-201ENST00000577708 61 ntBASIC18.08■□□□□ 0.48
LIMK1P53667 AC010327.4-202ENST00000591484 748 ntBASIC18.08■□□□□ 0.48
LIMK1P53667 MIR3687-1-201ENST00000614492 61 ntBASIC18.08■□□□□ 0.48
LIMK1P53667 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC18.08■□□□□ 0.48
LIMK1P53667 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC18.08■□□□□ 0.48
LIMK1P53667 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
LIMK1P53667 AC005082.1-201ENST00000413042 2259 ntBASIC18.08■□□□□ 0.48
LIMK1P53667 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
LIMK1P53667 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
LIMK1P53667 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC18.08■□□□□ 0.48
LIMK1P53667 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
LIMK1P53667 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC18.08■□□□□ 0.48
LIMK1P53667 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC18.08■□□□□ 0.48
LIMK1P53667 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
LIMK1P53667 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC18.07■□□□□ 0.48
LIMK1P53667 Z82202.1-201ENST00000623446 1880 ntBASIC18.07■□□□□ 0.48
LIMK1P53667 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LIMK1P53667 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
LIMK1P53667 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
LIMK1P53667 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC18.07■□□□□ 0.48
LIMK1P53667 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC18.07■□□□□ 0.48
LIMK1P53667 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC18.07■□□□□ 0.48
LIMK1P53667 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LIMK1P53667 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LIMK1P53667 RBM17P3-201ENST00000417687 1192 ntBASIC18.07■□□□□ 0.48
LIMK1P53667 MED15P5-201ENST00000423150 992 ntBASIC18.07■□□□□ 0.48
LIMK1P53667 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
LIMK1P53667 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC18.07■□□□□ 0.48
LIMK1P53667 AC004967.1-201ENST00000453589 447 ntBASIC18.07■□□□□ 0.48
LIMK1P53667 IGHV3-22-201ENST00000520721 359 ntBASIC18.07■□□□□ 0.48
LIMK1P53667 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC18.07■□□□□ 0.48
LIMK1P53667 MIR3197-201ENST00000582241 73 ntBASIC18.07■□□□□ 0.48
LIMK1P53667 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
LIMK1P53667 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
LIMK1P53667 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC18.07■□□□□ 0.48
LIMK1P53667 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LIMK1P53667 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LIMK1P53667 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
LIMK1P53667 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC18.07■□□□□ 0.48
LIMK1P53667 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LIMK1P53667 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC18.07■□□□□ 0.48
LIMK1P53667 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
LIMK1P53667 GAS2L1P1-201ENST00000420145 1480 ntBASIC18.07■□□□□ 0.48
LIMK1P53667 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
LIMK1P53667 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LIMK1P53667 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
LIMK1P53667 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LIMK1P53667 AL353692.3-201ENST00000407031 1396 ntBASIC18.06■□□□□ 0.48
LIMK1P53667 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LIMK1P53667 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
LIMK1P53667 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
LIMK1P53667 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC18.06■□□□□ 0.48
LIMK1P53667 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC18.06■□□□□ 0.48
LIMK1P53667 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC18.06■□□□□ 0.48
LIMK1P53667 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LIMK1P53667 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
LIMK1P53667 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LIMK1P53667 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC18.06■□□□□ 0.48
LIMK1P53667 AC132008.2-207ENST00000454517 770 ntBASIC18.06■□□□□ 0.48
LIMK1P53667 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC18.06■□□□□ 0.48
LIMK1P53667 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC18.06■□□□□ 0.48
LIMK1P53667 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC18.06■□□□□ 0.48
LIMK1P53667 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC18.06■□□□□ 0.48
LIMK1P53667 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC18.06■□□□□ 0.48
LIMK1P53667 AL356488.2-201ENST00000602755 427 ntBASIC18.06■□□□□ 0.48
LIMK1P53667 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
LIMK1P53667 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
LIMK1P53667 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LIMK1P53667 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LIMK1P53667 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
LIMK1P53667 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
LIMK1P53667 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC18.05■□□□□ 0.48
LIMK1P53667 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
LIMK1P53667 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
LIMK1P53667 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC18.05■□□□□ 0.48
LIMK1P53667 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LIMK1P53667 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LIMK1P53667 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
LIMK1P53667 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
LIMK1P53667 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC18.05■□□□□ 0.48
LIMK1P53667 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LIMK1P53667 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC18.05■□□□□ 0.48
LIMK1P53667 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LIMK1P53667 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
LIMK1P53667 CCS-201ENST00000310190 942 ntTSL 5 BASIC18.05■□□□□ 0.48
LIMK1P53667 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LIMK1P53667 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
LIMK1P53667 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC18.05■□□□□ 0.48
LIMK1P53667 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
LIMK1P53667 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC18.05■□□□□ 0.48
LIMK1P53667 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC18.05■□□□□ 0.48
LIMK1P53667 FGFR3P6-201ENST00000457012 610 ntBASIC18.05■□□□□ 0.48
LIMK1P53667 NMU-202ENST00000505262 693 ntTSL 3 BASIC18.05■□□□□ 0.48
LIMK1P53667 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC18.05■□□□□ 0.48
LIMK1P53667 ZNF815P-204ENST00000434898 1737 ntBASIC18.05■□□□□ 0.48
LIMK1P53667 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms