Protein–RNA interactions for Protein: P53384

NUBP1, Cytosolic Fe-S cluster assembly factor NUBP1, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUBP1P53384 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
NUBP1P53384 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC18.21■□□□□ 0.5
NUBP1P53384 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
NUBP1P53384 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NUBP1P53384 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC18.2■□□□□ 0.5
NUBP1P53384 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC18.2■□□□□ 0.5
NUBP1P53384 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC18.2■□□□□ 0.5
NUBP1P53384 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC18.2■□□□□ 0.5
NUBP1P53384 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NUBP1P53384 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
NUBP1P53384 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NUBP1P53384 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NUBP1P53384 COPE-202ENST00000349893 948 ntTSL 2 BASIC18.2■□□□□ 0.5
NUBP1P53384 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC18.2■□□□□ 0.5
NUBP1P53384 CD99-202ENST00000381180 530 ntTSL 2 BASIC18.2■□□□□ 0.5
NUBP1P53384 METTL26-204ENST00000397665 558 ntTSL 2 BASIC18.2■□□□□ 0.5
NUBP1P53384 TSEN15P1-201ENST00000423257 515 ntBASIC18.2■□□□□ 0.5
NUBP1P53384 KRT18P2-201ENST00000447938 1258 ntBASIC18.2■□□□□ 0.5
NUBP1P53384 CEND1P1-201ENST00000451006 455 ntBASIC18.2■□□□□ 0.5
NUBP1P53384 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC18.2■□□□□ 0.5
NUBP1P53384 AP000344.2-201ENST00000512987 629 ntBASIC18.2■□□□□ 0.5
NUBP1P53384 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC18.2■□□□□ 0.5
NUBP1P53384 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
NUBP1P53384 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC18.2■□□□□ 0.5
NUBP1P53384 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC18.2■□□□□ 0.5
NUBP1P53384 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NUBP1P53384 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NUBP1P53384 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NUBP1P53384 AL691432.2-201ENST00000607222 2038 ntBASIC18.2■□□□□ 0.5
NUBP1P53384 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NUBP1P53384 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NUBP1P53384 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
NUBP1P53384 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
NUBP1P53384 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC18.19■□□□□ 0.5
NUBP1P53384 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NUBP1P53384 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NUBP1P53384 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
NUBP1P53384 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC18.19■□□□□ 0.5
NUBP1P53384 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC18.19■□□□□ 0.5
NUBP1P53384 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
NUBP1P53384 AL358176.1-201ENST00000457477 357 ntTSL 5 BASIC18.19■□□□□ 0.5
NUBP1P53384 AC136632.2-201ENST00000512891 861 ntBASIC18.19■□□□□ 0.5
NUBP1P53384 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC18.19■□□□□ 0.5
NUBP1P53384 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
NUBP1P53384 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC18.19■□□□□ 0.5
NUBP1P53384 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
NUBP1P53384 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC18.19■□□□□ 0.5
NUBP1P53384 AL022326.1-202ENST00000641533 845 ntBASIC18.19■□□□□ 0.5
NUBP1P53384 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
NUBP1P53384 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NUBP1P53384 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
NUBP1P53384 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC18.19■□□□□ 0.5
NUBP1P53384 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NUBP1P53384 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NUBP1P53384 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
NUBP1P53384 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
NUBP1P53384 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC18.18■□□□□ 0.5
NUBP1P53384 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC18.18■□□□□ 0.5
NUBP1P53384 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NUBP1P53384 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
NUBP1P53384 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NUBP1P53384 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
NUBP1P53384 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NUBP1P53384 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
NUBP1P53384 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
NUBP1P53384 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC18.18■□□□□ 0.5
NUBP1P53384 AC240504.1-201ENST00000395709 845 ntBASIC18.18■□□□□ 0.5
NUBP1P53384 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC18.18■□□□□ 0.5
NUBP1P53384 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
NUBP1P53384 CRYGEP-201ENST00000412192 528 ntBASIC18.18■□□□□ 0.5
NUBP1P53384 AC003986.3-201ENST00000417460 692 ntTSL 3 BASIC18.18■□□□□ 0.5
NUBP1P53384 AC005034.1-201ENST00000426657 489 ntBASIC18.18■□□□□ 0.5
NUBP1P53384 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC18.18■□□□□ 0.5
NUBP1P53384 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC18.18■□□□□ 0.5
NUBP1P53384 MTCL1P1-201ENST00000446207 792 ntBASIC18.18■□□□□ 0.5
NUBP1P53384 AC068985.1-201ENST00000463297 703 ntTSL 5 BASIC18.18■□□□□ 0.5
NUBP1P53384 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC18.18■□□□□ 0.5
NUBP1P53384 MIR4745-201ENST00000577608 62 ntBASIC18.18■□□□□ 0.5
NUBP1P53384 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC18.18■□□□□ 0.5
NUBP1P53384 AL035252.4-201ENST00000624174 288 ntBASIC18.18■□□□□ 0.5
NUBP1P53384 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC18.18■□□□□ 0.5
NUBP1P53384 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
NUBP1P53384 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NUBP1P53384 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
NUBP1P53384 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC18.18■□□□□ 0.5
NUBP1P53384 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
NUBP1P53384 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
NUBP1P53384 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC18.18■□□□□ 0.5
NUBP1P53384 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC18.18■□□□□ 0.5
NUBP1P53384 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NUBP1P53384 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC18.18■□□□□ 0.5
NUBP1P53384 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
NUBP1P53384 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
NUBP1P53384 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
NUBP1P53384 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NUBP1P53384 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
NUBP1P53384 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NUBP1P53384 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
NUBP1P53384 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
NUBP1P53384 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 11.2 ms