Protein–RNA interactions for Protein: P52926

HMGA2, High mobility group protein HMGI-C, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2P52926 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
HMGA2P52926 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HMGA2P52926 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
HMGA2P52926 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
HMGA2P52926 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC16.73■□□□□ 0.27
HMGA2P52926 RPS15-203ENST00000586096 570 ntTSL 2 BASIC16.73■□□□□ 0.27
HMGA2P52926 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC16.73■□□□□ 0.27
HMGA2P52926 DGCR10-201ENST00000609839 495 ntBASIC16.73■□□□□ 0.27
HMGA2P52926 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC16.73■□□□□ 0.27
HMGA2P52926 TBCB-214ENST00000629269 413 ntTSL 5 BASIC16.73■□□□□ 0.27
HMGA2P52926 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
HMGA2P52926 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
HMGA2P52926 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC16.73■□□□□ 0.27
HMGA2P52926 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
HMGA2P52926 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC16.73■□□□□ 0.27
HMGA2P52926 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
HMGA2P52926 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
HMGA2P52926 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC16.73■□□□□ 0.27
HMGA2P52926 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HMGA2P52926 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC16.72■□□□□ 0.27
HMGA2P52926 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
HMGA2P52926 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HMGA2P52926 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
HMGA2P52926 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HMGA2P52926 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
HMGA2P52926 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC16.72■□□□□ 0.27
HMGA2P52926 LINC01126-201ENST00000623515 1646 ntBASIC16.72■□□□□ 0.27
HMGA2P52926 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HMGA2P52926 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC16.72■□□□□ 0.27
HMGA2P52926 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC16.72■□□□□ 0.27
HMGA2P52926 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC16.72■□□□□ 0.27
HMGA2P52926 AC116562.2-201ENST00000507042 360 ntBASIC16.72■□□□□ 0.27
HMGA2P52926 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC16.72■□□□□ 0.27
HMGA2P52926 NAT14-202ENST00000587400 416 ntTSL 5 BASIC16.72■□□□□ 0.27
HMGA2P52926 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
HMGA2P52926 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC16.72■□□□□ 0.27
HMGA2P52926 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
HMGA2P52926 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
HMGA2P52926 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
HMGA2P52926 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HMGA2P52926 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HMGA2P52926 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
HMGA2P52926 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HMGA2P52926 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
HMGA2P52926 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
HMGA2P52926 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC16.71■□□□□ 0.27
HMGA2P52926 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC16.71■□□□□ 0.27
HMGA2P52926 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
HMGA2P52926 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
HMGA2P52926 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
HMGA2P52926 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
HMGA2P52926 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
HMGA2P52926 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC16.71■□□□□ 0.27
HMGA2P52926 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC16.71■□□□□ 0.27
HMGA2P52926 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
HMGA2P52926 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC16.71■□□□□ 0.27
HMGA2P52926 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
HMGA2P52926 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC16.71■□□□□ 0.27
HMGA2P52926 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
HMGA2P52926 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
HMGA2P52926 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC16.71■□□□□ 0.27
HMGA2P52926 KIRREL3-AS3-201ENST00000404882 831 ntBASIC16.71■□□□□ 0.27
HMGA2P52926 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC16.71■□□□□ 0.27
HMGA2P52926 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC16.71■□□□□ 0.27
HMGA2P52926 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
HMGA2P52926 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC16.71■□□□□ 0.27
HMGA2P52926 TK2-204ENST00000525974 1178 ntTSL 2 BASIC16.71■□□□□ 0.27
HMGA2P52926 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC16.71■□□□□ 0.27
HMGA2P52926 AC006058.3-201ENST00000606217 1069 ntBASIC16.71■□□□□ 0.27
HMGA2P52926 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC16.71■□□□□ 0.27
HMGA2P52926 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
HMGA2P52926 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC16.71■□□□□ 0.27
HMGA2P52926 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.27
HMGA2P52926 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC16.71■□□□□ 0.27
HMGA2P52926 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
HMGA2P52926 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.26
HMGA2P52926 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC16.71■□□□□ 0.26
HMGA2P52926 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
HMGA2P52926 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.26
HMGA2P52926 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HMGA2P52926 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HMGA2P52926 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
HMGA2P52926 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HMGA2P52926 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
HMGA2P52926 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC16.7■□□□□ 0.26
HMGA2P52926 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
HMGA2P52926 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HMGA2P52926 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC16.7■□□□□ 0.26
HMGA2P52926 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HMGA2P52926 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
HMGA2P52926 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
HMGA2P52926 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC16.7■□□□□ 0.26
HMGA2P52926 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC16.7■□□□□ 0.26
HMGA2P52926 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC16.7■□□□□ 0.26
HMGA2P52926 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC16.7■□□□□ 0.26
HMGA2P52926 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
HMGA2P52926 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC16.7■□□□□ 0.26
HMGA2P52926 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC16.7■□□□□ 0.26
HMGA2P52926 MFAP1P1-201ENST00000442257 1255 ntBASIC16.7■□□□□ 0.26
HMGA2P52926 RPPH1-201ENST00000516869 333 ntBASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms