Protein–RNA interactions for Protein: P51861

CDR1, Cerebellar degeneration-related antigen 1, humanhuman

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDR1P51861 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
CDR1P51861 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CDR1P51861 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CDR1P51861 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CDR1P51861 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
CDR1P51861 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CDR1P51861 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
CDR1P51861 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC20.04■□□□□ 0.8
CDR1P51861 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC20.03■□□□□ 0.8
CDR1P51861 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CDR1P51861 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CDR1P51861 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC20.03■□□□□ 0.8
CDR1P51861 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CDR1P51861 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CDR1P51861 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CDR1P51861 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.8
CDR1P51861 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CDR1P51861 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC20.03■□□□□ 0.8
CDR1P51861 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CDR1P51861 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CDR1P51861 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CDR1P51861 AL023284.2-201ENST00000405850 579 ntBASIC20.03■□□□□ 0.8
CDR1P51861 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC20.03■□□□□ 0.8
CDR1P51861 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC20.03■□□□□ 0.8
CDR1P51861 GCSHP2-201ENST00000560971 527 ntBASIC20.03■□□□□ 0.8
CDR1P51861 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC20.03■□□□□ 0.8
CDR1P51861 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
CDR1P51861 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC20.03■□□□□ 0.8
CDR1P51861 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
CDR1P51861 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CDR1P51861 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CDR1P51861 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
CDR1P51861 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
CDR1P51861 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CDR1P51861 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CDR1P51861 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CDR1P51861 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC20.02■□□□□ 0.8
CDR1P51861 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC20.02■□□□□ 0.8
CDR1P51861 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC20.02■□□□□ 0.8
CDR1P51861 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC20.02■□□□□ 0.8
CDR1P51861 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CDR1P51861 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
CDR1P51861 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC20.02■□□□□ 0.8
CDR1P51861 AC092647.4-201ENST00000457211 535 ntBASIC20.02■□□□□ 0.8
CDR1P51861 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC20.02■□□□□ 0.8
CDR1P51861 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC20.02■□□□□ 0.8
CDR1P51861 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
CDR1P51861 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CDR1P51861 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC20.02■□□□□ 0.8
CDR1P51861 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC20.02■□□□□ 0.8
CDR1P51861 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CDR1P51861 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
CDR1P51861 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CDR1P51861 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC20.02■□□□□ 0.79
CDR1P51861 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC20.02■□□□□ 0.79
CDR1P51861 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
CDR1P51861 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
CDR1P51861 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
CDR1P51861 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
CDR1P51861 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CDR1P51861 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CDR1P51861 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC20.01■□□□□ 0.79
CDR1P51861 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
CDR1P51861 FP475955.4-201ENST00000623131 1990 ntBASIC20.01■□□□□ 0.79
CDR1P51861 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CDR1P51861 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CDR1P51861 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CDR1P51861 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CDR1P51861 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CDR1P51861 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CDR1P51861 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC20.01■□□□□ 0.79
CDR1P51861 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CDR1P51861 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC20.01■□□□□ 0.79
CDR1P51861 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CDR1P51861 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
CDR1P51861 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
CDR1P51861 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC20.01■□□□□ 0.79
CDR1P51861 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
CDR1P51861 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
CDR1P51861 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
CDR1P51861 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CDR1P51861 AC141586.3-201ENST00000562166 1838 ntBASIC20.01■□□□□ 0.79
CDR1P51861 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CDR1P51861 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
CDR1P51861 AL390961.4-201ENST00000623958 2535 ntBASIC20.01■□□□□ 0.79
CDR1P51861 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
CDR1P51861 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
CDR1P51861 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC20.01■□□□□ 0.79
CDR1P51861 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CDR1P51861 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CDR1P51861 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC20■□□□□ 0.79
CDR1P51861 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CDR1P51861 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC20■□□□□ 0.79
CDR1P51861 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CDR1P51861 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CDR1P51861 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC20■□□□□ 0.79
CDR1P51861 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC20■□□□□ 0.79
CDR1P51861 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
CDR1P51861 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC20■□□□□ 0.79
CDR1P51861 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC20■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms