Protein–RNA interactions for Protein: P50458

LHX2, LIM/homeobox protein Lhx2, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX2P50458 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
LHX2P50458 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LHX2P50458 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
LHX2P50458 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
LHX2P50458 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
LHX2P50458 LINC00265-3P-201ENST00000447588 903 ntBASIC16.32■□□□□ 0.2
LHX2P50458 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
LHX2P50458 WIZP1-201ENST00000531444 2299 ntBASIC16.32■□□□□ 0.2
LHX2P50458 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC16.32■□□□□ 0.2
LHX2P50458 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
LHX2P50458 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC16.32■□□□□ 0.2
LHX2P50458 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
LHX2P50458 AC087289.5-201ENST00000586076 3175 ntBASIC16.32■□□□□ 0.2
LHX2P50458 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
LHX2P50458 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
LHX2P50458 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LHX2P50458 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LHX2P50458 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LHX2P50458 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LHX2P50458 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LHX2P50458 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LHX2P50458 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
LHX2P50458 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
LHX2P50458 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LHX2P50458 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC16.31■□□□□ 0.2
LHX2P50458 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LHX2P50458 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC16.31■□□□□ 0.2
LHX2P50458 DUSP5P1-201ENST00000441325 1139 ntBASIC16.31■□□□□ 0.2
LHX2P50458 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC16.31■□□□□ 0.2
LHX2P50458 TOB2P1-201ENST00000469761 992 ntBASIC16.31■□□□□ 0.2
LHX2P50458 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC16.31■□□□□ 0.2
LHX2P50458 MIR3652-201ENST00000579335 131 ntBASIC16.31■□□□□ 0.2
LHX2P50458 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC16.31■□□□□ 0.2
LHX2P50458 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LHX2P50458 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LHX2P50458 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC16.31■□□□□ 0.2
LHX2P50458 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC16.31■□□□□ 0.2
LHX2P50458 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
LHX2P50458 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LHX2P50458 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC16.31■□□□□ 0.2
LHX2P50458 ESPNP-201ENST00000270691 2015 ntBASIC16.31■□□□□ 0.2
LHX2P50458 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LHX2P50458 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
LHX2P50458 MCC-208ENST00000514701 2855 ntTSL 2 BASIC16.31■□□□□ 0.2
LHX2P50458 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC16.31■□□□□ 0.2
LHX2P50458 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC16.31■□□□□ 0.2
LHX2P50458 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LHX2P50458 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC16.3■□□□□ 0.2
LHX2P50458 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC16.3■□□□□ 0.2
LHX2P50458 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
LHX2P50458 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
LHX2P50458 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LHX2P50458 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LHX2P50458 AL020996.1-203ENST00000536896 2307 ntBASIC16.3■□□□□ 0.2
LHX2P50458 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LHX2P50458 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LHX2P50458 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
LHX2P50458 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
LHX2P50458 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC16.3■□□□□ 0.2
LHX2P50458 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC16.3■□□□□ 0.2
LHX2P50458 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
LHX2P50458 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LHX2P50458 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LHX2P50458 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LHX2P50458 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC16.3■□□□□ 0.2
LHX2P50458 TSPY12P-201ENST00000421279 868 ntBASIC16.3■□□□□ 0.2
LHX2P50458 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
LHX2P50458 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LHX2P50458 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
LHX2P50458 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC16.3■□□□□ 0.2
LHX2P50458 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC16.3■□□□□ 0.2
LHX2P50458 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LHX2P50458 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC16.3■□□□□ 0.2
LHX2P50458 ANKRD20A8P-203ENST00000641373 517 ntBASIC16.3■□□□□ 0.2
LHX2P50458 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LHX2P50458 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LHX2P50458 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LHX2P50458 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
LHX2P50458 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
LHX2P50458 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC16.3■□□□□ 0.2
LHX2P50458 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
LHX2P50458 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
LHX2P50458 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LHX2P50458 USP49-202ENST00000373010 2446 ntTSL 5 BASIC16.29■□□□□ 0.2
LHX2P50458 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
LHX2P50458 AL138781.2-201ENST00000617896 1843 ntBASIC16.29■□□□□ 0.2
LHX2P50458 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC16.29■□□□□ 0.2
LHX2P50458 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
LHX2P50458 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LHX2P50458 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LHX2P50458 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
LHX2P50458 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LHX2P50458 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
LHX2P50458 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
LHX2P50458 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC16.29■□□□□ 0.2
LHX2P50458 KIRREL3-AS3-201ENST00000404882 831 ntBASIC16.29■□□□□ 0.2
LHX2P50458 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC16.29■□□□□ 0.2
LHX2P50458 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC16.29■□□□□ 0.2
LHX2P50458 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
LHX2P50458 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms