Protein–RNA interactions for Protein: P50416

CPT1A, Carnitine O-palmitoyltransferase 1, liver isoform, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1AP50416 MTDHP3-201ENST00000594186 672 ntBASIC20.26■□□□□ 0.83
CPT1AP50416 AL138831.2-201ENST00000606564 490 ntBASIC20.26■□□□□ 0.83
CPT1AP50416 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CPT1AP50416 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CPT1AP50416 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
CPT1AP50416 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CPT1AP50416 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CPT1AP50416 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CPT1AP50416 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CPT1AP50416 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
CPT1AP50416 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC20.25■□□□□ 0.83
CPT1AP50416 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CPT1AP50416 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CPT1AP50416 MED16-201ENST00000269814 1199 ntTSL 5 BASIC20.25■□□□□ 0.83
CPT1AP50416 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC20.25■□□□□ 0.83
CPT1AP50416 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC20.25■□□□□ 0.83
CPT1AP50416 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
CPT1AP50416 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC20.25■□□□□ 0.83
CPT1AP50416 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC20.25■□□□□ 0.83
CPT1AP50416 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC20.25■□□□□ 0.83
CPT1AP50416 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC20.25■□□□□ 0.83
CPT1AP50416 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC20.25■□□□□ 0.83
CPT1AP50416 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CPT1AP50416 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CPT1AP50416 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CPT1AP50416 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CPT1AP50416 INTS4P1-201ENST00000438455 1935 ntBASIC20.25■□□□□ 0.83
CPT1AP50416 COBL-210ENST00000632460 1941 ntTSL 5 BASIC20.25■□□□□ 0.83
CPT1AP50416 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC20.25■□□□□ 0.83
CPT1AP50416 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC20.25■□□□□ 0.83
CPT1AP50416 LINC00602-201ENST00000629776 2065 ntBASIC20.25■□□□□ 0.83
CPT1AP50416 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CPT1AP50416 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC20.25■□□□□ 0.83
CPT1AP50416 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CPT1AP50416 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CPT1AP50416 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CPT1AP50416 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CPT1AP50416 PAN3-AS1-201ENST00000563843 1351 ntBASIC20.24■□□□□ 0.83
CPT1AP50416 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
CPT1AP50416 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC20.24■□□□□ 0.83
CPT1AP50416 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CPT1AP50416 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC20.24■□□□□ 0.83
CPT1AP50416 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CPT1AP50416 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC20.24■□□□□ 0.83
CPT1AP50416 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC20.24■□□□□ 0.83
CPT1AP50416 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC20.24■□□□□ 0.83
CPT1AP50416 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC20.24■□□□□ 0.83
CPT1AP50416 SLC25A1P1-201ENST00000528351 927 ntBASIC20.24■□□□□ 0.83
CPT1AP50416 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC20.24■□□□□ 0.83
CPT1AP50416 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC20.24■□□□□ 0.83
CPT1AP50416 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC20.24■□□□□ 0.83
CPT1AP50416 AC011467.2-201ENST00000598425 242 ntBASIC20.24■□□□□ 0.83
CPT1AP50416 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC20.24■□□□□ 0.83
CPT1AP50416 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC20.24■□□□□ 0.83
CPT1AP50416 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CPT1AP50416 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CPT1AP50416 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC20.23■□□□□ 0.83
CPT1AP50416 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC20.23■□□□□ 0.83
CPT1AP50416 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CPT1AP50416 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CPT1AP50416 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
CPT1AP50416 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CPT1AP50416 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC20.23■□□□□ 0.83
CPT1AP50416 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CPT1AP50416 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CPT1AP50416 RPS2P28-201ENST00000314255 741 ntBASIC20.23■□□□□ 0.83
CPT1AP50416 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CPT1AP50416 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CPT1AP50416 AC125634.1-201ENST00000438758 1403 ntBASIC20.23■□□□□ 0.83
CPT1AP50416 KRT18P65-201ENST00000439811 1286 ntBASIC20.23■□□□□ 0.83
CPT1AP50416 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
CPT1AP50416 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC20.23■□□□□ 0.83
CPT1AP50416 KRT18P58-201ENST00000527480 1120 ntBASIC20.23■□□□□ 0.83
CPT1AP50416 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC20.23■□□□□ 0.83
CPT1AP50416 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC20.23■□□□□ 0.83
CPT1AP50416 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC20.23■□□□□ 0.83
CPT1AP50416 AP001269.4-201ENST00000609611 512 ntBASIC20.23■□□□□ 0.83
CPT1AP50416 PRKN-208ENST00000610470 531 ntTSL 2 BASIC20.23■□□□□ 0.83
CPT1AP50416 PRKN-209ENST00000612485 225 ntTSL 5 BASIC20.23■□□□□ 0.83
CPT1AP50416 AC005332.7-201ENST00000614046 2005 ntBASIC20.23■□□□□ 0.83
CPT1AP50416 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC20.23■□□□□ 0.83
CPT1AP50416 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CPT1AP50416 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC20.23■□□□□ 0.83
CPT1AP50416 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC20.23■□□□□ 0.83
CPT1AP50416 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC20.23■□□□□ 0.83
CPT1AP50416 ADK-206ENST00000541550 2222 ntTSL 2 BASIC20.23■□□□□ 0.83
CPT1AP50416 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC20.23■□□□□ 0.83
CPT1AP50416 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CPT1AP50416 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CPT1AP50416 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC20.23■□□□□ 0.83
CPT1AP50416 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
CPT1AP50416 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CPT1AP50416 AC243591.1-201ENST00000452967 1364 ntBASIC20.22■□□□□ 0.83
CPT1AP50416 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CPT1AP50416 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CPT1AP50416 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CPT1AP50416 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
CPT1AP50416 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CPT1AP50416 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CPT1AP50416 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC20.22■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms