Protein–RNA interactions for Protein: P49454

CENPF, Centromere protein F, humanhuman

Predictions only

Length 3,210 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CENPFP49454 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC20.59■□□□□ 0.89
CENPFP49454 ELL2P1-201ENST00000413990 1906 ntBASIC20.59■□□□□ 0.89
CENPFP49454 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC20.59■□□□□ 0.89
CENPFP49454 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CENPFP49454 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC20.59■□□□□ 0.89
CENPFP49454 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
CENPFP49454 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC20.59■□□□□ 0.89
CENPFP49454 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC20.59■□□□□ 0.89
CENPFP49454 AC093028.1-201ENST00000622998 982 ntBASIC20.59■□□□□ 0.89
CENPFP49454 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CENPFP49454 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
CENPFP49454 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC20.58■□□□□ 0.89
CENPFP49454 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC20.58■□□□□ 0.89
CENPFP49454 MCCD1P2-201ENST00000423228 335 ntBASIC20.58■□□□□ 0.89
CENPFP49454 KRT18P2-201ENST00000447938 1258 ntBASIC20.58■□□□□ 0.89
CENPFP49454 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC20.58■□□□□ 0.89
CENPFP49454 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC20.58■□□□□ 0.89
CENPFP49454 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC20.58■□□□□ 0.89
CENPFP49454 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC20.58■□□□□ 0.89
CENPFP49454 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC20.58■□□□□ 0.89
CENPFP49454 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC20.58■□□□□ 0.89
CENPFP49454 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC20.58■□□□□ 0.89
CENPFP49454 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC20.58■□□□□ 0.89
CENPFP49454 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CENPFP49454 NFYC-AS1-201ENST00000606277 1687 ntBASIC20.58■□□□□ 0.88
CENPFP49454 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CENPFP49454 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
CENPFP49454 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
CENPFP49454 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CENPFP49454 GREM1-201ENST00000560677 623 ntTSL 4 BASIC20.58■□□□□ 0.88
CENPFP49454 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CENPFP49454 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CENPFP49454 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CENPFP49454 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
CENPFP49454 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.88
CENPFP49454 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CENPFP49454 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC20.58■□□□□ 0.88
CENPFP49454 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CENPFP49454 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CENPFP49454 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CENPFP49454 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CENPFP49454 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC20.57■□□□□ 0.88
CENPFP49454 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
CENPFP49454 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
CENPFP49454 AC107918.4-202ENST00000641623 219 ntBASIC20.57■□□□□ 0.88
CENPFP49454 KRT8P50-201ENST00000562022 1438 ntBASIC20.57■□□□□ 0.88
CENPFP49454 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
CENPFP49454 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC20.57■□□□□ 0.88
CENPFP49454 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC20.57■□□□□ 0.88
CENPFP49454 AC005829.1-201ENST00000570002 483 ntBASIC20.57■□□□□ 0.88
CENPFP49454 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CENPFP49454 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
CENPFP49454 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC20.57■□□□□ 0.88
CENPFP49454 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
CENPFP49454 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
CENPFP49454 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC20.57■□□□□ 0.88
CENPFP49454 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC20.57■□□□□ 0.88
CENPFP49454 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CENPFP49454 AC092865.6-201ENST00000642101 219 ntBASIC20.57■□□□□ 0.88
CENPFP49454 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CENPFP49454 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CENPFP49454 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CENPFP49454 Z98044.1-201ENST00000632503 1764 ntBASIC20.56■□□□□ 0.88
CENPFP49454 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CENPFP49454 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CENPFP49454 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CENPFP49454 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC20.56■□□□□ 0.88
CENPFP49454 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
CENPFP49454 FUOM-202ENST00000368551 628 ntTSL 3 BASIC20.56■□□□□ 0.88
CENPFP49454 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC20.56■□□□□ 0.88
CENPFP49454 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC20.56■□□□□ 0.88
CENPFP49454 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC20.56■□□□□ 0.88
CENPFP49454 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC20.56■□□□□ 0.88
CENPFP49454 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
CENPFP49454 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CENPFP49454 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC20.56■□□□□ 0.88
CENPFP49454 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
CENPFP49454 AC125634.1-201ENST00000438758 1403 ntBASIC20.56■□□□□ 0.88
CENPFP49454 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC20.56■□□□□ 0.88
CENPFP49454 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
CENPFP49454 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC20.56■□□□□ 0.88
CENPFP49454 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CENPFP49454 AC254562.1-201ENST00000417586 456 ntBASIC20.55■□□□□ 0.88
CENPFP49454 RPS29-206ENST00000557111 488 ntTSL 2 BASIC20.55■□□□□ 0.88
CENPFP49454 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC20.55■□□□□ 0.88
CENPFP49454 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CENPFP49454 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
CENPFP49454 MTMR9LP-203ENST00000426597 1545 ntBASIC20.55■□□□□ 0.88
CENPFP49454 AP002414.3-201ENST00000589352 1468 ntBASIC20.55■□□□□ 0.88
CENPFP49454 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CENPFP49454 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CENPFP49454 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CENPFP49454 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CENPFP49454 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
CENPFP49454 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CENPFP49454 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC20.55■□□□□ 0.88
CENPFP49454 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CENPFP49454 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
CENPFP49454 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
CENPFP49454 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms