Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
CX3CR1P49238 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
CX3CR1P49238 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC16.13■□□□□ 0.17
CX3CR1P49238 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
CX3CR1P49238 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC16.13■□□□□ 0.17
CX3CR1P49238 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC16.13■□□□□ 0.17
CX3CR1P49238 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
CX3CR1P49238 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
CX3CR1P49238 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC16.12■□□□□ 0.17
CX3CR1P49238 AC068880.1-201ENST00000507289 2297 ntBASIC16.12■□□□□ 0.17
CX3CR1P49238 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
CX3CR1P49238 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CX3CR1P49238 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CX3CR1P49238 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
CX3CR1P49238 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC16.12■□□□□ 0.17
CX3CR1P49238 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CX3CR1P49238 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CX3CR1P49238 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CX3CR1P49238 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CX3CR1P49238 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC16.12■□□□□ 0.17
CX3CR1P49238 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
CX3CR1P49238 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CX3CR1P49238 SNCG-201ENST00000348795 684 ntTSL 2 BASIC16.12■□□□□ 0.17
CX3CR1P49238 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC16.12■□□□□ 0.17
CX3CR1P49238 SLC25A1P2-201ENST00000430693 912 ntBASIC16.12■□□□□ 0.17
CX3CR1P49238 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
CX3CR1P49238 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC16.12■□□□□ 0.17
CX3CR1P49238 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CX3CR1P49238 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC16.12■□□□□ 0.17
CX3CR1P49238 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC16.12■□□□□ 0.17
CX3CR1P49238 AP006294.2-201ENST00000641667 209 ntBASIC16.12■□□□□ 0.17
CX3CR1P49238 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CX3CR1P49238 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
CX3CR1P49238 ESPNP-201ENST00000270691 2015 ntBASIC16.12■□□□□ 0.17
CX3CR1P49238 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CX3CR1P49238 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CX3CR1P49238 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
CX3CR1P49238 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
CX3CR1P49238 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
CX3CR1P49238 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CX3CR1P49238 AC093677.2-201ENST00000600169 1863 ntBASIC16.12■□□□□ 0.17
CX3CR1P49238 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
CX3CR1P49238 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CX3CR1P49238 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC16.11■□□□□ 0.17
CX3CR1P49238 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CX3CR1P49238 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC16.11■□□□□ 0.17
CX3CR1P49238 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CX3CR1P49238 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CX3CR1P49238 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CX3CR1P49238 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CX3CR1P49238 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC16.11■□□□□ 0.17
CX3CR1P49238 PRR31-201ENST00000371629 978 ntTSL 2 BASIC16.11■□□□□ 0.17
CX3CR1P49238 AL390955.1-201ENST00000428694 934 ntBASIC16.11■□□□□ 0.17
CX3CR1P49238 TSPY17P-201ENST00000450329 467 ntBASIC16.11■□□□□ 0.17
CX3CR1P49238 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC16.11■□□□□ 0.17
CX3CR1P49238 AP003041.3-201ENST00000527151 707 ntBASIC16.11■□□□□ 0.17
CX3CR1P49238 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC16.11■□□□□ 0.17
CX3CR1P49238 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CX3CR1P49238 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC16.11■□□□□ 0.17
CX3CR1P49238 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CX3CR1P49238 FLYWCH1P1-201ENST00000460917 1874 ntBASIC16.11■□□□□ 0.17
CX3CR1P49238 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC16.11■□□□□ 0.17
CX3CR1P49238 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CX3CR1P49238 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC16.11■□□□□ 0.17
CX3CR1P49238 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC16.11■□□□□ 0.17
CX3CR1P49238 PXK-206ENST00000463280 2825 ntTSL 2 BASIC16.11■□□□□ 0.17
CX3CR1P49238 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
CX3CR1P49238 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CX3CR1P49238 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CX3CR1P49238 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CX3CR1P49238 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CX3CR1P49238 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
CX3CR1P49238 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
CX3CR1P49238 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC16.11■□□□□ 0.17
CX3CR1P49238 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CX3CR1P49238 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CX3CR1P49238 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CX3CR1P49238 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC16.1■□□□□ 0.17
CX3CR1P49238 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CX3CR1P49238 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CX3CR1P49238 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CX3CR1P49238 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC16.1■□□□□ 0.17
CX3CR1P49238 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CX3CR1P49238 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC16.1■□□□□ 0.17
CX3CR1P49238 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC16.1■□□□□ 0.17
CX3CR1P49238 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
CX3CR1P49238 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CX3CR1P49238 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CX3CR1P49238 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CX3CR1P49238 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CX3CR1P49238 MIR1238-201ENST00000408483 83 ntBASIC16.1■□□□□ 0.17
CX3CR1P49238 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC16.1■□□□□ 0.17
CX3CR1P49238 CCR12P-201ENST00000446203 998 ntBASIC16.1■□□□□ 0.17
CX3CR1P49238 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC16.1■□□□□ 0.17
CX3CR1P49238 SNORA78-201ENST00000459373 127 ntBASIC16.1■□□□□ 0.17
CX3CR1P49238 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
CX3CR1P49238 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
CX3CR1P49238 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
CX3CR1P49238 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC16.1■□□□□ 0.17
CX3CR1P49238 AL023803.3-201ENST00000615559 522 ntBASIC16.1■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms