Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
LHX1P48742 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
LHX1P48742 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC19.36■□□□□ 0.69
LHX1P48742 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC19.36■□□□□ 0.69
LHX1P48742 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
LHX1P48742 AL138781.2-201ENST00000617896 1843 ntBASIC19.36■□□□□ 0.69
LHX1P48742 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
LHX1P48742 WIZP1-201ENST00000531444 2299 ntBASIC19.36■□□□□ 0.69
LHX1P48742 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
LHX1P48742 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC19.36■□□□□ 0.69
LHX1P48742 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
LHX1P48742 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
LHX1P48742 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
LHX1P48742 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
LHX1P48742 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
LHX1P48742 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC19.35■□□□□ 0.69
LHX1P48742 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
LHX1P48742 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
LHX1P48742 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC19.35■□□□□ 0.69
LHX1P48742 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
LHX1P48742 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
LHX1P48742 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
LHX1P48742 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
LHX1P48742 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
LHX1P48742 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC19.35■□□□□ 0.69
LHX1P48742 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
LHX1P48742 TPSP2-201ENST00000561760 610 ntBASIC19.35■□□□□ 0.69
LHX1P48742 MPI-205ENST00000562606 1052 ntTSL 3 BASIC19.35■□□□□ 0.69
LHX1P48742 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
LHX1P48742 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC19.35■□□□□ 0.69
LHX1P48742 AC124864.1-201ENST00000623408 392 ntBASIC19.35■□□□□ 0.69
LHX1P48742 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
LHX1P48742 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
LHX1P48742 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
LHX1P48742 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
LHX1P48742 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
LHX1P48742 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC19.35■□□□□ 0.69
LHX1P48742 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC19.35■□□□□ 0.69
LHX1P48742 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
LHX1P48742 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
LHX1P48742 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LHX1P48742 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC19.34■□□□□ 0.69
LHX1P48742 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
LHX1P48742 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
LHX1P48742 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
LHX1P48742 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
LHX1P48742 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LHX1P48742 ESPNP-201ENST00000270691 2015 ntBASIC19.34■□□□□ 0.69
LHX1P48742 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LHX1P48742 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LHX1P48742 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LHX1P48742 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
LHX1P48742 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
LHX1P48742 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
LHX1P48742 TSPY12P-201ENST00000421279 868 ntBASIC19.34■□□□□ 0.69
LHX1P48742 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC19.34■□□□□ 0.69
LHX1P48742 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC19.34■□□□□ 0.69
LHX1P48742 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC19.34■□□□□ 0.69
LHX1P48742 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC19.34■□□□□ 0.69
LHX1P48742 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC19.34■□□□□ 0.69
LHX1P48742 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
LHX1P48742 AL592071.1-201ENST00000611956 408 ntBASIC19.34■□□□□ 0.69
LHX1P48742 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LHX1P48742 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
LHX1P48742 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LHX1P48742 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
LHX1P48742 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
LHX1P48742 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
LHX1P48742 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
LHX1P48742 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
LHX1P48742 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
LHX1P48742 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC19.33■□□□□ 0.69
LHX1P48742 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC19.33■□□□□ 0.69
LHX1P48742 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
LHX1P48742 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
LHX1P48742 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
LHX1P48742 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC19.33■□□□□ 0.69
LHX1P48742 PPIH-202ENST00000372549 327 ntTSL 3 BASIC19.33■□□□□ 0.68
LHX1P48742 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC19.33■□□□□ 0.68
LHX1P48742 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC19.33■□□□□ 0.68
LHX1P48742 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC19.33■□□□□ 0.68
LHX1P48742 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC19.33■□□□□ 0.68
LHX1P48742 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC19.33■□□□□ 0.68
LHX1P48742 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
LHX1P48742 CIB2-208ENST00000560618 804 ntTSL 2 BASIC19.33■□□□□ 0.68
LHX1P48742 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC19.33■□□□□ 0.68
LHX1P48742 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
LHX1P48742 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC19.33■□□□□ 0.68
LHX1P48742 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC19.33■□□□□ 0.68
LHX1P48742 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC19.33■□□□□ 0.68
LHX1P48742 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC19.33■□□□□ 0.68
LHX1P48742 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
LHX1P48742 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
LHX1P48742 AC087289.5-201ENST00000586076 3175 ntBASIC19.33■□□□□ 0.68
LHX1P48742 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
LHX1P48742 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC19.33■□□□□ 0.68
LHX1P48742 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
LHX1P48742 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC19.33■□□□□ 0.68
LHX1P48742 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
LHX1P48742 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms