Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
SLC6A12P48065 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC17.68■□□□□ 0.42
SLC6A12P48065 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SLC6A12P48065 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC17.67■□□□□ 0.42
SLC6A12P48065 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
SLC6A12P48065 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SLC6A12P48065 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SLC6A12P48065 AL133373.2-201ENST00000623187 2828 ntBASIC17.67■□□□□ 0.42
SLC6A12P48065 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SLC6A12P48065 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SLC6A12P48065 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SLC6A12P48065 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
SLC6A12P48065 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SLC6A12P48065 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC17.67■□□□□ 0.42
SLC6A12P48065 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
SLC6A12P48065 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC17.67■□□□□ 0.42
SLC6A12P48065 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
SLC6A12P48065 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC17.67■□□□□ 0.42
SLC6A12P48065 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
SLC6A12P48065 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC17.67■□□□□ 0.42
SLC6A12P48065 AL137013.1-201ENST00000432946 1228 ntBASIC17.67■□□□□ 0.42
SLC6A12P48065 SLC25A6P5-201ENST00000435663 894 ntBASIC17.67■□□□□ 0.42
SLC6A12P48065 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC17.67■□□□□ 0.42
SLC6A12P48065 ATP5G1P1-201ENST00000448724 379 ntBASIC17.67■□□□□ 0.42
SLC6A12P48065 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC17.67■□□□□ 0.42
SLC6A12P48065 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC17.67■□□□□ 0.42
SLC6A12P48065 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC17.67■□□□□ 0.42
SLC6A12P48065 AL441883.1-201ENST00000566170 1045 ntBASIC17.67■□□□□ 0.42
SLC6A12P48065 P4HB-223ENST00000576390 439 ntTSL 4 BASIC17.67■□□□□ 0.42
SLC6A12P48065 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
SLC6A12P48065 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
SLC6A12P48065 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC17.67■□□□□ 0.42
SLC6A12P48065 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SLC6A12P48065 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SLC6A12P48065 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC17.67■□□□□ 0.42
SLC6A12P48065 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SLC6A12P48065 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC17.67■□□□□ 0.42
SLC6A12P48065 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC17.67■□□□□ 0.42
SLC6A12P48065 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SLC6A12P48065 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SLC6A12P48065 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
SLC6A12P48065 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
SLC6A12P48065 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC17.67■□□□□ 0.42
SLC6A12P48065 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC17.66■□□□□ 0.42
SLC6A12P48065 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SLC6A12P48065 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SLC6A12P48065 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SLC6A12P48065 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SLC6A12P48065 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
SLC6A12P48065 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SLC6A12P48065 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SLC6A12P48065 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SLC6A12P48065 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SLC6A12P48065 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
SLC6A12P48065 AC211429.1-201ENST00000415277 523 ntBASIC17.66■□□□□ 0.42
SLC6A12P48065 AL031432.5-201ENST00000641059 760 ntBASIC17.66■□□□□ 0.42
SLC6A12P48065 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
SLC6A12P48065 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SLC6A12P48065 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SLC6A12P48065 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SLC6A12P48065 GATB-213ENST00000515812 1893 ntTSL 5 BASIC17.66■□□□□ 0.42
SLC6A12P48065 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SLC6A12P48065 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
SLC6A12P48065 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SLC6A12P48065 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SLC6A12P48065 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
SLC6A12P48065 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SLC6A12P48065 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SLC6A12P48065 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC17.65■□□□□ 0.42
SLC6A12P48065 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC17.65■□□□□ 0.42
SLC6A12P48065 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
SLC6A12P48065 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SLC6A12P48065 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SLC6A12P48065 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC17.65■□□□□ 0.42
SLC6A12P48065 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SLC6A12P48065 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SLC6A12P48065 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SLC6A12P48065 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SLC6A12P48065 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SLC6A12P48065 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SLC6A12P48065 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SLC6A12P48065 ANKRD20A18P-201ENST00000359341 492 ntBASIC17.65■□□□□ 0.42
SLC6A12P48065 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SLC6A12P48065 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SLC6A12P48065 AC034232.1-201ENST00000506026 1064 ntBASIC17.65■□□□□ 0.42
SLC6A12P48065 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
SLC6A12P48065 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC17.65■□□□□ 0.42
SLC6A12P48065 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC17.65■□□□□ 0.42
SLC6A12P48065 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC17.65■□□□□ 0.42
SLC6A12P48065 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SLC6A12P48065 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SLC6A12P48065 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SLC6A12P48065 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC17.65■□□□□ 0.42
SLC6A12P48065 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
SLC6A12P48065 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SLC6A12P48065 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SLC6A12P48065 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SLC6A12P48065 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SLC6A12P48065 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SLC6A12P48065 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms