Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
SSR1P43307 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
SSR1P43307 AL354751.1-201ENST00000412768 1863 ntBASIC19.5■□□□□ 0.71
SSR1P43307 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
SSR1P43307 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SSR1P43307 GPAT2P1-201ENST00000444924 1672 ntBASIC19.5■□□□□ 0.71
SSR1P43307 AL109659.2-201ENST00000606809 1674 ntBASIC19.5■□□□□ 0.71
SSR1P43307 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SSR1P43307 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC19.5■□□□□ 0.71
SSR1P43307 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
SSR1P43307 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC19.5■□□□□ 0.71
SSR1P43307 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC19.5■□□□□ 0.71
SSR1P43307 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
SSR1P43307 AL023284.2-201ENST00000405850 579 ntBASIC19.5■□□□□ 0.71
SSR1P43307 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
SSR1P43307 TSPY7P-201ENST00000431358 1114 ntBASIC19.5■□□□□ 0.71
SSR1P43307 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC19.5■□□□□ 0.71
SSR1P43307 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC19.5■□□□□ 0.71
SSR1P43307 AC008550.1-201ENST00000511500 884 ntBASIC19.5■□□□□ 0.71
SSR1P43307 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
SSR1P43307 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
SSR1P43307 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SSR1P43307 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SSR1P43307 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC19.5■□□□□ 0.71
SSR1P43307 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
SSR1P43307 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC19.5■□□□□ 0.71
SSR1P43307 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SSR1P43307 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC19.5■□□□□ 0.71
SSR1P43307 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC19.5■□□□□ 0.71
SSR1P43307 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SSR1P43307 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
SSR1P43307 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SSR1P43307 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SSR1P43307 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC19.49■□□□□ 0.71
SSR1P43307 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC19.49■□□□□ 0.71
SSR1P43307 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC19.49■□□□□ 0.71
SSR1P43307 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
SSR1P43307 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SSR1P43307 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SSR1P43307 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC19.49■□□□□ 0.71
SSR1P43307 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SSR1P43307 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SSR1P43307 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC19.49■□□□□ 0.71
SSR1P43307 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC19.49■□□□□ 0.71
SSR1P43307 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC19.49■□□□□ 0.71
SSR1P43307 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC19.49■□□□□ 0.71
SSR1P43307 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SSR1P43307 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC19.49■□□□□ 0.71
SSR1P43307 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
SSR1P43307 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC19.49■□□□□ 0.71
SSR1P43307 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
SSR1P43307 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SSR1P43307 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SSR1P43307 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
SSR1P43307 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
SSR1P43307 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC19.49■□□□□ 0.71
SSR1P43307 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC19.49■□□□□ 0.71
SSR1P43307 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC19.49■□□□□ 0.71
SSR1P43307 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
SSR1P43307 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SSR1P43307 AC079598.2-202ENST00000546624 1451 ntBASIC19.48■□□□□ 0.71
SSR1P43307 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
SSR1P43307 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC19.48■□□□□ 0.71
SSR1P43307 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SSR1P43307 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SSR1P43307 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SSR1P43307 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
SSR1P43307 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC19.48■□□□□ 0.71
SSR1P43307 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SSR1P43307 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC19.48■□□□□ 0.71
SSR1P43307 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC19.48■□□□□ 0.71
SSR1P43307 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC19.48■□□□□ 0.71
SSR1P43307 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SSR1P43307 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SSR1P43307 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SSR1P43307 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SSR1P43307 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SSR1P43307 KRT8P45-201ENST00000414328 1447 ntBASIC19.48■□□□□ 0.71
SSR1P43307 CD276-201ENST00000318424 2738 ntTSL 5 BASIC19.48■□□□□ 0.71
SSR1P43307 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC19.48■□□□□ 0.71
SSR1P43307 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SSR1P43307 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SSR1P43307 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
SSR1P43307 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SSR1P43307 AC099343.3-201ENST00000605834 2503 ntBASIC19.48■□□□□ 0.71
SSR1P43307 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC19.48■□□□□ 0.71
SSR1P43307 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SSR1P43307 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SSR1P43307 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SSR1P43307 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SSR1P43307 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SSR1P43307 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SSR1P43307 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
SSR1P43307 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SSR1P43307 ABALON-201ENST00000629058 1903 ntBASIC19.47■□□□□ 0.71
SSR1P43307 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SSR1P43307 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
SSR1P43307 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SSR1P43307 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC19.47■□□□□ 0.71
SSR1P43307 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms