Protein–RNA interactions for Protein: P42773

CDKN2C, Cyclin-dependent kinase 4 inhibitor C, humanhuman

Predictions only

Length 168 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2CP42773 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
CDKN2CP42773 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CDKN2CP42773 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDKN2CP42773 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
CDKN2CP42773 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC17.34■□□□□ 0.37
CDKN2CP42773 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CDKN2CP42773 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CDKN2CP42773 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CDKN2CP42773 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC17.33■□□□□ 0.37
CDKN2CP42773 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.37
CDKN2CP42773 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
CDKN2CP42773 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CDKN2CP42773 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
CDKN2CP42773 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC17.33■□□□□ 0.37
CDKN2CP42773 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC17.33■□□□□ 0.37
CDKN2CP42773 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CDKN2CP42773 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC17.33■□□□□ 0.37
CDKN2CP42773 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
CDKN2CP42773 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CDKN2CP42773 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
CDKN2CP42773 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CDKN2CP42773 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CDKN2CP42773 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CDKN2CP42773 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC17.33■□□□□ 0.36
CDKN2CP42773 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC17.33■□□□□ 0.36
CDKN2CP42773 AC233702.5-201ENST00000584107 538 ntBASIC17.33■□□□□ 0.36
CDKN2CP42773 NAT14-202ENST00000587400 416 ntTSL 5 BASIC17.33■□□□□ 0.36
CDKN2CP42773 AL049637.2-201ENST00000641778 930 ntBASIC17.33■□□□□ 0.36
CDKN2CP42773 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CDKN2CP42773 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
CDKN2CP42773 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
CDKN2CP42773 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC17.33■□□□□ 0.36
CDKN2CP42773 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
CDKN2CP42773 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CDKN2CP42773 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
CDKN2CP42773 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CDKN2CP42773 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC17.33■□□□□ 0.36
CDKN2CP42773 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC17.33■□□□□ 0.36
CDKN2CP42773 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
CDKN2CP42773 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CDKN2CP42773 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CDKN2CP42773 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.36
CDKN2CP42773 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
CDKN2CP42773 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDKN2CP42773 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDKN2CP42773 CYP51A1P1-201ENST00000492267 1507 ntBASIC17.32■□□□□ 0.36
CDKN2CP42773 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC17.32■□□□□ 0.36
CDKN2CP42773 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDKN2CP42773 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CDKN2CP42773 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDKN2CP42773 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
CDKN2CP42773 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
CDKN2CP42773 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC17.32■□□□□ 0.36
CDKN2CP42773 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDKN2CP42773 PRR31-201ENST00000371629 978 ntTSL 2 BASIC17.32■□□□□ 0.36
CDKN2CP42773 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
CDKN2CP42773 AC012618.2-201ENST00000428058 849 ntBASIC17.32■□□□□ 0.36
CDKN2CP42773 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC17.32■□□□□ 0.36
CDKN2CP42773 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CDKN2CP42773 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC17.32■□□□□ 0.36
CDKN2CP42773 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC17.32■□□□□ 0.36
CDKN2CP42773 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDKN2CP42773 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDKN2CP42773 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CDKN2CP42773 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDKN2CP42773 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDKN2CP42773 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CDKN2CP42773 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CDKN2CP42773 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CDKN2CP42773 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDKN2CP42773 FST-202ENST00000396947 2538 ntTSL 5 BASIC17.31■□□□□ 0.36
CDKN2CP42773 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDKN2CP42773 AC009102.3-201ENST00000623118 1491 ntBASIC17.31■□□□□ 0.36
CDKN2CP42773 SP100-208ENST00000427101 1922 ntTSL 2 BASIC17.31■□□□□ 0.36
CDKN2CP42773 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC17.31■□□□□ 0.36
CDKN2CP42773 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDKN2CP42773 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDKN2CP42773 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDKN2CP42773 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDKN2CP42773 AC012317.2-201ENST00000623305 2251 ntBASIC17.31■□□□□ 0.36
CDKN2CP42773 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CDKN2CP42773 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDKN2CP42773 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDKN2CP42773 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDKN2CP42773 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDKN2CP42773 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDKN2CP42773 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC17.31■□□□□ 0.36
CDKN2CP42773 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDKN2CP42773 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
CDKN2CP42773 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDKN2CP42773 UBE2SP1-201ENST00000450587 669 ntBASIC17.31■□□□□ 0.36
CDKN2CP42773 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CDKN2CP42773 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC17.31■□□□□ 0.36
CDKN2CP42773 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CDKN2CP42773 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC17.31■□□□□ 0.36
CDKN2CP42773 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC17.31■□□□□ 0.36
CDKN2CP42773 DECR2-212ENST00000627716 352 ntTSL 2 BASIC17.31■□□□□ 0.36
CDKN2CP42773 HLA-DQB1-201ENST00000374943 1656 ntBASIC17.31■□□□□ 0.36
CDKN2CP42773 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC17.31■□□□□ 0.36
CDKN2CP42773 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms