Protein–RNA interactions for Protein: P41235

HNF4A, Hepatocyte nuclear factor 4-alpha, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4AP41235 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
HNF4AP41235 AC010203.1-204ENST00000548782 407 ntBASIC17.77■□□□□ 0.44
HNF4AP41235 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC17.77■□□□□ 0.44
HNF4AP41235 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
HNF4AP41235 GPX4-207ENST00000589115 812 ntTSL 2 BASIC17.77■□□□□ 0.44
HNF4AP41235 AC112497.1-201ENST00000624824 639 ntBASIC17.77■□□□□ 0.44
HNF4AP41235 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
HNF4AP41235 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
HNF4AP41235 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
HNF4AP41235 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC17.77■□□□□ 0.44
HNF4AP41235 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
HNF4AP41235 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
HNF4AP41235 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
HNF4AP41235 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.43
HNF4AP41235 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
HNF4AP41235 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
HNF4AP41235 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
HNF4AP41235 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
HNF4AP41235 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
HNF4AP41235 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC17.77■□□□□ 0.43
HNF4AP41235 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
HNF4AP41235 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
HNF4AP41235 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
HNF4AP41235 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
HNF4AP41235 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HNF4AP41235 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC17.76■□□□□ 0.43
HNF4AP41235 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
HNF4AP41235 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC17.76■□□□□ 0.43
HNF4AP41235 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC17.76■□□□□ 0.43
HNF4AP41235 AC135776.1-201ENST00000319817 2481 ntBASIC17.76■□□□□ 0.43
HNF4AP41235 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HNF4AP41235 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HNF4AP41235 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
HNF4AP41235 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC17.76■□□□□ 0.43
HNF4AP41235 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
HNF4AP41235 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
HNF4AP41235 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
HNF4AP41235 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC17.76■□□□□ 0.43
HNF4AP41235 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HNF4AP41235 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC17.76■□□□□ 0.43
HNF4AP41235 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
HNF4AP41235 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
HNF4AP41235 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC17.76■□□□□ 0.43
HNF4AP41235 Telomerase-vert.1-201ENST00000363312 438 ntBASIC17.76■□□□□ 0.43
HNF4AP41235 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC17.76■□□□□ 0.43
HNF4AP41235 AL137013.1-201ENST00000432946 1228 ntBASIC17.76■□□□□ 0.43
HNF4AP41235 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC17.76■□□□□ 0.43
HNF4AP41235 AC009947.2-201ENST00000444014 672 ntBASIC17.76■□□□□ 0.43
HNF4AP41235 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC17.76■□□□□ 0.43
HNF4AP41235 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC17.76■□□□□ 0.43
HNF4AP41235 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC17.76■□□□□ 0.43
HNF4AP41235 MIR3180-4-201ENST00000582223 153 ntBASIC17.76■□□□□ 0.43
HNF4AP41235 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
HNF4AP41235 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
HNF4AP41235 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HNF4AP41235 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
HNF4AP41235 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC17.76■□□□□ 0.43
HNF4AP41235 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC17.76■□□□□ 0.43
HNF4AP41235 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HNF4AP41235 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
HNF4AP41235 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC17.76■□□□□ 0.43
HNF4AP41235 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC17.76■□□□□ 0.43
HNF4AP41235 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
HNF4AP41235 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
HNF4AP41235 AC009102.3-201ENST00000623118 1491 ntBASIC17.75■□□□□ 0.43
HNF4AP41235 AC093677.2-201ENST00000600169 1863 ntBASIC17.75■□□□□ 0.43
HNF4AP41235 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HNF4AP41235 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
HNF4AP41235 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
HNF4AP41235 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HNF4AP41235 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HNF4AP41235 GMCL1P1-201ENST00000463439 1581 ntBASIC17.75■□□□□ 0.43
HNF4AP41235 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
HNF4AP41235 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
HNF4AP41235 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
HNF4AP41235 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
HNF4AP41235 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC17.75■□□□□ 0.43
HNF4AP41235 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HNF4AP41235 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
HNF4AP41235 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
HNF4AP41235 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HNF4AP41235 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
HNF4AP41235 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
HNF4AP41235 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
HNF4AP41235 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
HNF4AP41235 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HNF4AP41235 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HNF4AP41235 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
HNF4AP41235 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HNF4AP41235 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC17.75■□□□□ 0.43
HNF4AP41235 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
HNF4AP41235 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HNF4AP41235 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HNF4AP41235 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC17.75■□□□□ 0.43
HNF4AP41235 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HNF4AP41235 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HNF4AP41235 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC17.75■□□□□ 0.43
HNF4AP41235 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC17.75■□□□□ 0.43
HNF4AP41235 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
HNF4AP41235 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 53.3 ms