Protein–RNA interactions for Protein: P39905

GDNF, Glial cell line-derived neurotrophic factor, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDNFP39905 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
GDNFP39905 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
GDNFP39905 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC15.97■□□□□ 0.15
GDNFP39905 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
GDNFP39905 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
GDNFP39905 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
GDNFP39905 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
GDNFP39905 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC15.97■□□□□ 0.15
GDNFP39905 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
GDNFP39905 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
GDNFP39905 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC15.97■□□□□ 0.15
GDNFP39905 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC15.97■□□□□ 0.15
GDNFP39905 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC15.97■□□□□ 0.15
GDNFP39905 FAM201B-201ENST00000458407 597 ntBASIC15.97■□□□□ 0.15
GDNFP39905 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC15.97■□□□□ 0.15
GDNFP39905 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
GDNFP39905 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
GDNFP39905 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC15.97■□□□□ 0.15
GDNFP39905 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC15.97■□□□□ 0.15
GDNFP39905 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
GDNFP39905 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
GDNFP39905 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
GDNFP39905 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
GDNFP39905 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
GDNFP39905 POR-209ENST00000439269 1858 ntTSL 2 BASIC15.97■□□□□ 0.15
GDNFP39905 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC15.97■□□□□ 0.15
GDNFP39905 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC15.97■□□□□ 0.15
GDNFP39905 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
GDNFP39905 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
GDNFP39905 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
GDNFP39905 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
GDNFP39905 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
GDNFP39905 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC15.96■□□□□ 0.15
GDNFP39905 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
GDNFP39905 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
GDNFP39905 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC15.96■□□□□ 0.15
GDNFP39905 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
GDNFP39905 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
GDNFP39905 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC15.96■□□□□ 0.15
GDNFP39905 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC15.96■□□□□ 0.15
GDNFP39905 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
GDNFP39905 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
GDNFP39905 MTMR9LP-203ENST00000426597 1545 ntBASIC15.96■□□□□ 0.15
GDNFP39905 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC15.96■□□□□ 0.15
GDNFP39905 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC15.96■□□□□ 0.15
GDNFP39905 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
GDNFP39905 RHOD-202ENST00000532559 538 ntTSL 3 BASIC15.96■□□□□ 0.15
GDNFP39905 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
GDNFP39905 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
GDNFP39905 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
GDNFP39905 MMD2-204ENST00000612910 778 ntTSL 5 BASIC15.96■□□□□ 0.15
GDNFP39905 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC15.96■□□□□ 0.15
GDNFP39905 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
GDNFP39905 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
GDNFP39905 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC15.96■□□□□ 0.15
GDNFP39905 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
GDNFP39905 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
GDNFP39905 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.14
GDNFP39905 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
GDNFP39905 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC15.96■□□□□ 0.14
GDNFP39905 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
GDNFP39905 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
GDNFP39905 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC15.96■□□□□ 0.14
GDNFP39905 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
GDNFP39905 NFYC-AS1-201ENST00000606277 1687 ntBASIC15.95■□□□□ 0.14
GDNFP39905 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
GDNFP39905 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC15.95■□□□□ 0.14
GDNFP39905 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
GDNFP39905 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC15.95■□□□□ 0.14
GDNFP39905 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC15.95■□□□□ 0.14
GDNFP39905 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
GDNFP39905 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
GDNFP39905 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC15.95■□□□□ 0.14
GDNFP39905 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
GDNFP39905 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
GDNFP39905 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
GDNFP39905 ISG20-202ENST00000379224 540 ntTSL 3 BASIC15.95■□□□□ 0.14
GDNFP39905 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC15.95■□□□□ 0.14
GDNFP39905 C1QBPP2-201ENST00000528754 825 ntBASIC15.95■□□□□ 0.14
GDNFP39905 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC15.95■□□□□ 0.14
GDNFP39905 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC15.95■□□□□ 0.14
GDNFP39905 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC15.95■□□□□ 0.14
GDNFP39905 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC15.95■□□□□ 0.14
GDNFP39905 MYC-208ENST00000641036 567 ntBASIC15.95■□□□□ 0.14
GDNFP39905 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC15.95■□□□□ 0.14
GDNFP39905 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
GDNFP39905 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
GDNFP39905 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
GDNFP39905 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
GDNFP39905 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
GDNFP39905 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC15.95■□□□□ 0.14
GDNFP39905 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
GDNFP39905 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC15.95■□□□□ 0.14
GDNFP39905 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
GDNFP39905 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
GDNFP39905 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
GDNFP39905 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
GDNFP39905 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
GDNFP39905 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
GDNFP39905 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms