Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 AC113404.2-201ENST00000507884 177 ntBASIC18.22■□□□□ 0.51
HMGCLP35914 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC18.22■□□□□ 0.51
HMGCLP35914 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC18.22■□□□□ 0.51
HMGCLP35914 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
HMGCLP35914 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
HMGCLP35914 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
HMGCLP35914 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
HMGCLP35914 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC18.22■□□□□ 0.51
HMGCLP35914 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
HMGCLP35914 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC18.22■□□□□ 0.51
HMGCLP35914 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
HMGCLP35914 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
HMGCLP35914 ABALON-201ENST00000629058 1903 ntBASIC18.21■□□□□ 0.51
HMGCLP35914 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
HMGCLP35914 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
HMGCLP35914 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC18.21■□□□□ 0.51
HMGCLP35914 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC18.21■□□□□ 0.51
HMGCLP35914 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
HMGCLP35914 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
HMGCLP35914 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
HMGCLP35914 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
HMGCLP35914 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
HMGCLP35914 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
HMGCLP35914 AL354751.1-201ENST00000412768 1863 ntBASIC18.21■□□□□ 0.51
HMGCLP35914 FLYWCH1P1-201ENST00000460917 1874 ntBASIC18.21■□□□□ 0.51
HMGCLP35914 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC18.21■□□□□ 0.51
HMGCLP35914 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
HMGCLP35914 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC18.21■□□□□ 0.51
HMGCLP35914 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC18.21■□□□□ 0.51
HMGCLP35914 ZNF444P1-201ENST00000559497 298 ntBASIC18.21■□□□□ 0.51
HMGCLP35914 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC18.21■□□□□ 0.51
HMGCLP35914 TEN1-204ENST00000588202 862 ntTSL 3 BASIC18.21■□□□□ 0.51
HMGCLP35914 TK1-205ENST00000590862 642 ntTSL 3 BASIC18.21■□□□□ 0.51
HMGCLP35914 NTF6B-201ENST00000591913 560 ntBASIC18.21■□□□□ 0.51
HMGCLP35914 SPEG-225ENST00000617028 815 ntTSL 5 BASIC18.21■□□□□ 0.51
HMGCLP35914 LITAF-220ENST00000620789 692 ntTSL 5 BASIC18.21■□□□□ 0.51
HMGCLP35914 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
HMGCLP35914 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
HMGCLP35914 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
HMGCLP35914 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
HMGCLP35914 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
HMGCLP35914 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
HMGCLP35914 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
HMGCLP35914 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
HMGCLP35914 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC18.2■□□□□ 0.5
HMGCLP35914 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC18.2■□□□□ 0.5
HMGCLP35914 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
HMGCLP35914 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
HMGCLP35914 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
HMGCLP35914 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
HMGCLP35914 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC18.2■□□□□ 0.5
HMGCLP35914 AL031133.1-201ENST00000406807 723 ntBASIC18.2■□□□□ 0.5
HMGCLP35914 DAP-202ENST00000432074 1048 ntTSL 2 BASIC18.2■□□□□ 0.5
HMGCLP35914 SPDYE13P-201ENST00000445314 798 ntBASIC18.2■□□□□ 0.5
HMGCLP35914 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
HMGCLP35914 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC18.2■□□□□ 0.5
HMGCLP35914 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC18.2■□□□□ 0.5
HMGCLP35914 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
HMGCLP35914 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
HMGCLP35914 AL096828.2-201ENST00000567259 1965 ntBASIC18.2■□□□□ 0.5
HMGCLP35914 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
HMGCLP35914 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
HMGCLP35914 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC18.2■□□□□ 0.5
HMGCLP35914 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
HMGCLP35914 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
HMGCLP35914 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
HMGCLP35914 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
HMGCLP35914 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
HMGCLP35914 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC18.19■□□□□ 0.5
HMGCLP35914 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC18.19■□□□□ 0.5
HMGCLP35914 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
HMGCLP35914 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
HMGCLP35914 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
HMGCLP35914 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
HMGCLP35914 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
HMGCLP35914 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
HMGCLP35914 HES2-202ENST00000377836 507 ntTSL 2 BASIC18.19■□□□□ 0.5
HMGCLP35914 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC18.19■□□□□ 0.5
HMGCLP35914 KRT18P48-201ENST00000434763 852 ntBASIC18.19■□□□□ 0.5
HMGCLP35914 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC18.19■□□□□ 0.5
HMGCLP35914 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC18.19■□□□□ 0.5
HMGCLP35914 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC18.19■□□□□ 0.5
HMGCLP35914 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC18.19■□□□□ 0.5
HMGCLP35914 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC18.19■□□□□ 0.5
HMGCLP35914 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
HMGCLP35914 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC18.19■□□□□ 0.5
HMGCLP35914 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC18.19■□□□□ 0.5
HMGCLP35914 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
HMGCLP35914 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
HMGCLP35914 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
HMGCLP35914 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
HMGCLP35914 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
HMGCLP35914 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
HMGCLP35914 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC18.19■□□□□ 0.5
HMGCLP35914 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
HMGCLP35914 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
HMGCLP35914 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC18.19■□□□□ 0.5
HMGCLP35914 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
HMGCLP35914 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
HMGCLP35914 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms