Protein–RNA interactions for Protein: P35606

COPB2, Coatomer subunit beta', humanhuman

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2P35606 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.93
COPB2P35606 SNCG-201ENST00000348795 684 ntTSL 2 BASIC20.89■□□□□ 0.93
COPB2P35606 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
COPB2P35606 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
COPB2P35606 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC20.89■□□□□ 0.93
COPB2P35606 AP000347.1-202ENST00000435868 847 ntBASIC20.89■□□□□ 0.93
COPB2P35606 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
COPB2P35606 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC20.89■□□□□ 0.93
COPB2P35606 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC20.89■□□□□ 0.93
COPB2P35606 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
COPB2P35606 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
COPB2P35606 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
COPB2P35606 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC20.89■□□□□ 0.93
COPB2P35606 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC20.89■□□□□ 0.93
COPB2P35606 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
COPB2P35606 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
COPB2P35606 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
COPB2P35606 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC20.89■□□□□ 0.93
COPB2P35606 UROS-202ENST00000368778 1556 ntTSL 2 BASIC20.89■□□□□ 0.93
COPB2P35606 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC20.88■□□□□ 0.93
COPB2P35606 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
COPB2P35606 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC20.88■□□□□ 0.93
COPB2P35606 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC20.88■□□□□ 0.93
COPB2P35606 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
COPB2P35606 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
COPB2P35606 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
COPB2P35606 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
COPB2P35606 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC20.88■□□□□ 0.93
COPB2P35606 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
COPB2P35606 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
COPB2P35606 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC20.88■□□□□ 0.93
COPB2P35606 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC20.88■□□□□ 0.93
COPB2P35606 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC20.88■□□□□ 0.93
COPB2P35606 AC096582.2-201ENST00000510860 516 ntBASIC20.88■□□□□ 0.93
COPB2P35606 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC20.88■□□□□ 0.93
COPB2P35606 IRF8-202ENST00000562492 946 ntTSL 3 BASIC20.88■□□□□ 0.93
COPB2P35606 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC20.88■□□□□ 0.93
COPB2P35606 MIR5100-201ENST00000579544 119 ntBASIC20.88■□□□□ 0.93
COPB2P35606 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
COPB2P35606 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
COPB2P35606 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC20.88■□□□□ 0.93
COPB2P35606 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC20.88■□□□□ 0.93
COPB2P35606 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
COPB2P35606 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
COPB2P35606 MCC-208ENST00000514701 2855 ntTSL 2 BASIC20.87■□□□□ 0.93
COPB2P35606 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
COPB2P35606 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC20.87■□□□□ 0.93
COPB2P35606 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC20.87■□□□□ 0.93
COPB2P35606 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC20.87■□□□□ 0.93
COPB2P35606 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
COPB2P35606 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
COPB2P35606 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
COPB2P35606 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
COPB2P35606 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
COPB2P35606 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC20.87■□□□□ 0.93
COPB2P35606 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
COPB2P35606 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
COPB2P35606 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
COPB2P35606 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
COPB2P35606 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
COPB2P35606 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
COPB2P35606 MRPL3P1-201ENST00000400109 1033 ntBASIC20.87■□□□□ 0.93
COPB2P35606 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC20.87■□□□□ 0.93
COPB2P35606 DANCR-204ENST00000444958 709 ntTSL 3 BASIC20.87■□□□□ 0.93
COPB2P35606 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
COPB2P35606 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC20.87■□□□□ 0.93
COPB2P35606 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC20.87■□□□□ 0.93
COPB2P35606 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC20.87■□□□□ 0.93
COPB2P35606 AF238378.1-201ENST00000526806 358 ntBASIC20.87■□□□□ 0.93
COPB2P35606 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC20.87■□□□□ 0.93
COPB2P35606 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
COPB2P35606 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC20.87■□□□□ 0.93
COPB2P35606 AP000974.1-201ENST00000623909 2387 ntBASIC20.87■□□□□ 0.93
COPB2P35606 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
COPB2P35606 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC20.87■□□□□ 0.93
COPB2P35606 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
COPB2P35606 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
COPB2P35606 AC018445.3-201ENST00000624177 1945 ntBASIC20.86■□□□□ 0.93
COPB2P35606 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
COPB2P35606 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC20.86■□□□□ 0.93
COPB2P35606 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC20.86■□□□□ 0.93
COPB2P35606 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC20.86■□□□□ 0.93
COPB2P35606 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
COPB2P35606 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC20.86■□□□□ 0.93
COPB2P35606 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC20.86■□□□□ 0.93
COPB2P35606 AC009154.2-201ENST00000621177 724 ntBASIC20.86■□□□□ 0.93
COPB2P35606 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
COPB2P35606 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
COPB2P35606 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
COPB2P35606 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
COPB2P35606 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
COPB2P35606 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC20.86■□□□□ 0.93
COPB2P35606 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
COPB2P35606 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
COPB2P35606 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
COPB2P35606 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC20.85■□□□□ 0.93
COPB2P35606 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
COPB2P35606 HLA-A-201ENST00000376802 1334 ntBASIC20.85■□□□□ 0.93
COPB2P35606 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC20.85■□□□□ 0.93
COPB2P35606 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms