Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 AC004263.2-201ENST00000617183 678 ntBASIC15.78■□□□□ 0.12
CD40P25942 AC012313.10-201ENST00000623509 926 ntBASIC15.78■□□□□ 0.12
CD40P25942 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
CD40P25942 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC15.78■□□□□ 0.12
CD40P25942 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CD40P25942 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CD40P25942 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC15.78■□□□□ 0.12
CD40P25942 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CD40P25942 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
CD40P25942 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
CD40P25942 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC15.78■□□□□ 0.12
CD40P25942 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
CD40P25942 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
CD40P25942 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
CD40P25942 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC15.78■□□□□ 0.12
CD40P25942 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CD40P25942 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
CD40P25942 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC15.77■□□□□ 0.12
CD40P25942 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CD40P25942 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CD40P25942 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CD40P25942 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
CD40P25942 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CD40P25942 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CD40P25942 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CD40P25942 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CD40P25942 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC15.77■□□□□ 0.12
CD40P25942 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CD40P25942 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC15.77■□□□□ 0.12
CD40P25942 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
CD40P25942 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC15.77■□□□□ 0.12
CD40P25942 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
CD40P25942 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
CD40P25942 TOB2P1-201ENST00000469761 992 ntBASIC15.77■□□□□ 0.12
CD40P25942 AC113404.2-201ENST00000507884 177 ntBASIC15.77■□□□□ 0.12
CD40P25942 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC15.77■□□□□ 0.12
CD40P25942 AP000867.3-201ENST00000524675 377 ntBASIC15.77■□□□□ 0.12
CD40P25942 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC15.77■□□□□ 0.12
CD40P25942 AL592071.1-201ENST00000611956 408 ntBASIC15.77■□□□□ 0.12
CD40P25942 AC124864.1-201ENST00000623408 392 ntBASIC15.77■□□□□ 0.12
CD40P25942 AL024508.2-201ENST00000607749 1894 ntBASIC15.77■□□□□ 0.11
CD40P25942 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.11
CD40P25942 AL031598.1-201ENST00000561511 1773 ntBASIC15.77■□□□□ 0.11
CD40P25942 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CD40P25942 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
CD40P25942 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
CD40P25942 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC15.77■□□□□ 0.11
CD40P25942 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CD40P25942 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC15.76■□□□□ 0.11
CD40P25942 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
CD40P25942 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CD40P25942 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CD40P25942 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
CD40P25942 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC15.76■□□□□ 0.11
CD40P25942 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
CD40P25942 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CD40P25942 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
CD40P25942 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
CD40P25942 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CD40P25942 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC15.76■□□□□ 0.11
CD40P25942 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CD40P25942 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CD40P25942 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CD40P25942 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC15.76■□□□□ 0.11
CD40P25942 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CD40P25942 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC15.76■□□□□ 0.11
CD40P25942 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
CD40P25942 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC15.76■□□□□ 0.11
CD40P25942 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC15.76■□□□□ 0.11
CD40P25942 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC15.76■□□□□ 0.11
CD40P25942 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC15.76■□□□□ 0.11
CD40P25942 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC15.76■□□□□ 0.11
CD40P25942 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC15.76■□□□□ 0.11
CD40P25942 ADK-206ENST00000541550 2222 ntTSL 2 BASIC15.76■□□□□ 0.11
CD40P25942 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CD40P25942 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CD40P25942 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC15.76■□□□□ 0.11
CD40P25942 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
CD40P25942 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CD40P25942 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
CD40P25942 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CD40P25942 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
CD40P25942 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC15.76■□□□□ 0.11
CD40P25942 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
CD40P25942 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC15.75■□□□□ 0.11
CD40P25942 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CD40P25942 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CD40P25942 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC15.75■□□□□ 0.11
CD40P25942 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CD40P25942 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
CD40P25942 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CD40P25942 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CD40P25942 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CD40P25942 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CD40P25942 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CD40P25942 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
CD40P25942 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CD40P25942 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CD40P25942 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CD40P25942 DDT-203ENST00000403754 569 ntTSL 3 BASIC15.75■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms