Protein–RNA interactions for Protein: P24386

CHM, Rab proteins geranylgeranyltransferase component A 1, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP24386 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
CHMP24386 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC17.14■□□□□ 0.33
CHMP24386 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
CHMP24386 GXYLT1P6-201ENST00000456472 1187 ntBASIC17.14■□□□□ 0.33
CHMP24386 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC17.14■□□□□ 0.33
CHMP24386 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
CHMP24386 AL512604.3-201ENST00000569583 964 ntBASIC17.14■□□□□ 0.33
CHMP24386 GPX4-207ENST00000589115 812 ntTSL 2 BASIC17.14■□□□□ 0.33
CHMP24386 FAM87A-204ENST00000613235 858 ntBASIC17.14■□□□□ 0.33
CHMP24386 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CHMP24386 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
CHMP24386 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC17.14■□□□□ 0.33
CHMP24386 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
CHMP24386 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CHMP24386 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
CHMP24386 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC17.13■□□□□ 0.33
CHMP24386 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC17.13■□□□□ 0.33
CHMP24386 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
CHMP24386 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC17.13■□□□□ 0.33
CHMP24386 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC17.13■□□□□ 0.33
CHMP24386 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
CHMP24386 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CHMP24386 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CHMP24386 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CHMP24386 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CHMP24386 INGX-201ENST00000359239 846 ntBASIC17.13■□□□□ 0.33
CHMP24386 TMPOP1-202ENST00000424642 1267 ntBASIC17.13■□□□□ 0.33
CHMP24386 LIN28AP1-201ENST00000429574 405 ntBASIC17.13■□□□□ 0.33
CHMP24386 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
CHMP24386 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
CHMP24386 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC17.13■□□□□ 0.33
CHMP24386 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC17.13■□□□□ 0.33
CHMP24386 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC17.13■□□□□ 0.33
CHMP24386 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CHMP24386 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CHMP24386 ESPNP-201ENST00000270691 2015 ntBASIC17.13■□□□□ 0.33
CHMP24386 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CHMP24386 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CHMP24386 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CHMP24386 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC17.12■□□□□ 0.33
CHMP24386 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CHMP24386 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CHMP24386 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
CHMP24386 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
CHMP24386 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC17.12■□□□□ 0.33
CHMP24386 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CHMP24386 MTMR9LP-203ENST00000426597 1545 ntBASIC17.12■□□□□ 0.33
CHMP24386 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
CHMP24386 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CHMP24386 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CHMP24386 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CHMP24386 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC17.12■□□□□ 0.33
CHMP24386 AC005521.1-201ENST00000393351 872 ntBASIC17.12■□□□□ 0.33
CHMP24386 MIR1224-201ENST00000408193 85 ntBASIC17.12■□□□□ 0.33
CHMP24386 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC17.12■□□□□ 0.33
CHMP24386 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC17.12■□□□□ 0.33
CHMP24386 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC17.12■□□□□ 0.33
CHMP24386 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC17.12■□□□□ 0.33
CHMP24386 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC17.12■□□□□ 0.33
CHMP24386 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC17.12■□□□□ 0.33
CHMP24386 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC17.12■□□□□ 0.33
CHMP24386 NFYC-AS1-201ENST00000606277 1687 ntBASIC17.12■□□□□ 0.33
CHMP24386 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CHMP24386 AC135776.1-201ENST00000319817 2481 ntBASIC17.12■□□□□ 0.33
CHMP24386 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CHMP24386 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC17.12■□□□□ 0.33
CHMP24386 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC17.12■□□□□ 0.33
CHMP24386 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CHMP24386 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC17.12■□□□□ 0.33
CHMP24386 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CHMP24386 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CHMP24386 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC17.12■□□□□ 0.33
CHMP24386 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
CHMP24386 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC17.11■□□□□ 0.33
CHMP24386 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CHMP24386 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC17.11■□□□□ 0.33
CHMP24386 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CHMP24386 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC17.11■□□□□ 0.33
CHMP24386 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
CHMP24386 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
CHMP24386 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC17.11■□□□□ 0.33
CHMP24386 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CHMP24386 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC17.11■□□□□ 0.33
CHMP24386 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC17.11■□□□□ 0.33
CHMP24386 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC17.11■□□□□ 0.33
CHMP24386 TERF1P1-201ENST00000311003 1181 ntBASIC17.11■□□□□ 0.33
CHMP24386 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CHMP24386 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CHMP24386 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC17.11■□□□□ 0.33
CHMP24386 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
CHMP24386 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC17.11■□□□□ 0.33
CHMP24386 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC17.11■□□□□ 0.33
CHMP24386 AP003041.3-201ENST00000527151 707 ntBASIC17.11■□□□□ 0.33
CHMP24386 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CHMP24386 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
CHMP24386 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC17.11■□□□□ 0.33
CHMP24386 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CHMP24386 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC17.11■□□□□ 0.33
CHMP24386 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
CHMP24386 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms