Protein–RNA interactions for Protein: P16615

ATP2A2, Sarcoplasmic/endoplasmic reticulum calcium ATPase 2, humanhuman

Known RBP Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A2P16615 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC20.22■□□□□ 0.83
ATP2A2P16615 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC20.22■□□□□ 0.83
ATP2A2P16615 AC104390.1-201ENST00000555663 520 ntBASIC20.22■□□□□ 0.83
ATP2A2P16615 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC20.22■□□□□ 0.83
ATP2A2P16615 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
ATP2A2P16615 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC20.22■□□□□ 0.83
ATP2A2P16615 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
ATP2A2P16615 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
ATP2A2P16615 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
ATP2A2P16615 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ATP2A2P16615 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ATP2A2P16615 AC093484.2-201ENST00000580996 2166 ntBASIC20.22■□□□□ 0.83
ATP2A2P16615 AP000974.1-201ENST00000623909 2387 ntBASIC20.22■□□□□ 0.83
ATP2A2P16615 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
ATP2A2P16615 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
ATP2A2P16615 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC20.22■□□□□ 0.83
ATP2A2P16615 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC20.22■□□□□ 0.83
ATP2A2P16615 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ATP2A2P16615 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
ATP2A2P16615 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC20.21■□□□□ 0.83
ATP2A2P16615 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
ATP2A2P16615 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ATP2A2P16615 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ATP2A2P16615 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
ATP2A2P16615 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ATP2A2P16615 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ATP2A2P16615 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC20.21■□□□□ 0.83
ATP2A2P16615 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
ATP2A2P16615 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
ATP2A2P16615 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC20.21■□□□□ 0.83
ATP2A2P16615 TLE1-202ENST00000376484 666 ntTSL 3 BASIC20.21■□□□□ 0.83
ATP2A2P16615 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC20.21■□□□□ 0.83
ATP2A2P16615 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC20.21■□□□□ 0.83
ATP2A2P16615 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC20.21■□□□□ 0.83
ATP2A2P16615 BET1L-206ENST00000486280 665 ntTSL 3 BASIC20.21■□□□□ 0.83
ATP2A2P16615 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC20.21■□□□□ 0.83
ATP2A2P16615 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC20.21■□□□□ 0.83
ATP2A2P16615 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
ATP2A2P16615 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC20.21■□□□□ 0.83
ATP2A2P16615 AF238378.1-201ENST00000526806 358 ntBASIC20.21■□□□□ 0.83
ATP2A2P16615 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC20.21■□□□□ 0.83
ATP2A2P16615 AL773604.1-201ENST00000617417 272 ntBASIC20.21■□□□□ 0.83
ATP2A2P16615 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC20.21■□□□□ 0.83
ATP2A2P16615 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ATP2A2P16615 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
ATP2A2P16615 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ATP2A2P16615 AC004408.2-201ENST00000623613 2777 ntBASIC20.21■□□□□ 0.83
ATP2A2P16615 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC20.21■□□□□ 0.83
ATP2A2P16615 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ATP2A2P16615 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ATP2A2P16615 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC20.21■□□□□ 0.83
ATP2A2P16615 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
ATP2A2P16615 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC20.2■□□□□ 0.83
ATP2A2P16615 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC20.2■□□□□ 0.82
ATP2A2P16615 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
ATP2A2P16615 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
ATP2A2P16615 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC20.2■□□□□ 0.82
ATP2A2P16615 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ATP2A2P16615 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ATP2A2P16615 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ATP2A2P16615 LSM5-204ENST00000409909 740 ntTSL 2 BASIC20.2■□□□□ 0.82
ATP2A2P16615 NUS1P2-201ENST00000417358 873 ntBASIC20.2■□□□□ 0.82
ATP2A2P16615 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC20.2■□□□□ 0.82
ATP2A2P16615 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
ATP2A2P16615 RNA5SP419-201ENST00000515908 135 ntBASIC20.2■□□□□ 0.82
ATP2A2P16615 GPR32P1-201ENST00000601788 811 ntBASIC20.2■□□□□ 0.82
ATP2A2P16615 AL592071.1-201ENST00000611956 408 ntBASIC20.2■□□□□ 0.82
ATP2A2P16615 TP73-AS1-207ENST00000624167 988 ntBASIC20.2■□□□□ 0.82
ATP2A2P16615 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC20.2■□□□□ 0.82
ATP2A2P16615 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ATP2A2P16615 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ATP2A2P16615 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC20.2■□□□□ 0.82
ATP2A2P16615 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
ATP2A2P16615 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ATP2A2P16615 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
ATP2A2P16615 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
ATP2A2P16615 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ATP2A2P16615 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ATP2A2P16615 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ATP2A2P16615 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ATP2A2P16615 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
ATP2A2P16615 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ATP2A2P16615 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
ATP2A2P16615 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ATP2A2P16615 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ATP2A2P16615 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ATP2A2P16615 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
ATP2A2P16615 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ATP2A2P16615 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ATP2A2P16615 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
ATP2A2P16615 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC20.19■□□□□ 0.82
ATP2A2P16615 VENTXP7-201ENST00000475503 772 ntBASIC20.19■□□□□ 0.82
ATP2A2P16615 KRT18P58-201ENST00000527480 1120 ntBASIC20.19■□□□□ 0.82
ATP2A2P16615 SLC25A1P1-201ENST00000528351 927 ntBASIC20.19■□□□□ 0.82
ATP2A2P16615 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC20.19■□□□□ 0.82
ATP2A2P16615 AC092865.5-201ENST00000545435 363 ntBASIC20.19■□□□□ 0.82
ATP2A2P16615 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ATP2A2P16615 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC20.19■□□□□ 0.82
ATP2A2P16615 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
ATP2A2P16615 AC124864.1-201ENST00000623408 392 ntBASIC20.19■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms