Protein–RNA interactions for Protein: P13236

CCL4, C-C motif chemokine 4, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL4P13236 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCL4P13236 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCL4P13236 TLE1-202ENST00000376484 666 ntTSL 3 BASIC17.26■□□□□ 0.35
CCL4P13236 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC17.26■□□□□ 0.35
CCL4P13236 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCL4P13236 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC17.26■□□□□ 0.35
CCL4P13236 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC17.26■□□□□ 0.35
CCL4P13236 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC17.26■□□□□ 0.35
CCL4P13236 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCL4P13236 SLC25A1P1-201ENST00000528351 927 ntBASIC17.26■□□□□ 0.35
CCL4P13236 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC17.26■□□□□ 0.35
CCL4P13236 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CCL4P13236 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CCL4P13236 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC17.26■□□□□ 0.35
CCL4P13236 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCL4P13236 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCL4P13236 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCL4P13236 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
CCL4P13236 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
CCL4P13236 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC17.26■□□□□ 0.35
CCL4P13236 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
CCL4P13236 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
CCL4P13236 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCL4P13236 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCL4P13236 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCL4P13236 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC17.25■□□□□ 0.35
CCL4P13236 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCL4P13236 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
CCL4P13236 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CCL4P13236 CCS-201ENST00000310190 942 ntTSL 5 BASIC17.25■□□□□ 0.35
CCL4P13236 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CCL4P13236 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC17.25■□□□□ 0.35
CCL4P13236 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCL4P13236 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC17.25■□□□□ 0.35
CCL4P13236 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC17.25■□□□□ 0.35
CCL4P13236 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC17.25■□□□□ 0.35
CCL4P13236 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC17.25■□□□□ 0.35
CCL4P13236 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCL4P13236 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
CCL4P13236 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCL4P13236 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC17.25■□□□□ 0.35
CCL4P13236 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCL4P13236 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
CCL4P13236 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC17.25■□□□□ 0.35
CCL4P13236 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CCL4P13236 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CCL4P13236 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
CCL4P13236 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CCL4P13236 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
CCL4P13236 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CCL4P13236 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CCL4P13236 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCL4P13236 COBL-210ENST00000632460 1941 ntTSL 5 BASIC17.24■□□□□ 0.35
CCL4P13236 MED16-201ENST00000269814 1199 ntTSL 5 BASIC17.24■□□□□ 0.35
CCL4P13236 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCL4P13236 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC17.24■□□□□ 0.35
CCL4P13236 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCL4P13236 MIR574-201ENST00000385209 96 ntBASIC17.24■□□□□ 0.35
CCL4P13236 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC17.24■□□□□ 0.35
CCL4P13236 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CCL4P13236 MTCL1P1-201ENST00000446207 792 ntBASIC17.24■□□□□ 0.35
CCL4P13236 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CCL4P13236 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC17.24■□□□□ 0.35
CCL4P13236 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC17.24■□□□□ 0.35
CCL4P13236 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CCL4P13236 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC17.24■□□□□ 0.35
CCL4P13236 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC17.24■□□□□ 0.35
CCL4P13236 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC17.24■□□□□ 0.35
CCL4P13236 COX5A-204ENST00000567270 579 ntTSL 3 BASIC17.24■□□□□ 0.35
CCL4P13236 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC17.24■□□□□ 0.35
CCL4P13236 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC17.24■□□□□ 0.35
CCL4P13236 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCL4P13236 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC17.24■□□□□ 0.35
CCL4P13236 AC116562.4-201ENST00000641316 2276 ntBASIC17.24■□□□□ 0.35
CCL4P13236 LINC01126-201ENST00000623515 1646 ntBASIC17.24■□□□□ 0.35
CCL4P13236 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCL4P13236 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CCL4P13236 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
CCL4P13236 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CCL4P13236 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
CCL4P13236 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC17.23■□□□□ 0.35
CCL4P13236 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCL4P13236 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCL4P13236 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCL4P13236 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC17.23■□□□□ 0.35
CCL4P13236 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCL4P13236 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC17.23■□□□□ 0.35
CCL4P13236 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
CCL4P13236 RNPS1P1-201ENST00000507437 918 ntBASIC17.23■□□□□ 0.35
CCL4P13236 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC17.23■□□□□ 0.35
CCL4P13236 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC17.23■□□□□ 0.35
CCL4P13236 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC17.23■□□□□ 0.35
CCL4P13236 MTDHP3-201ENST00000594186 672 ntBASIC17.23■□□□□ 0.35
CCL4P13236 AL049840.3-201ENST00000602669 611 ntBASIC17.23■□□□□ 0.35
CCL4P13236 AC009154.2-201ENST00000621177 724 ntBASIC17.23■□□□□ 0.35
CCL4P13236 AL355877.3-201ENST00000622820 899 ntBASIC17.23■□□□□ 0.35
CCL4P13236 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCL4P13236 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
CCL4P13236 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC17.23■□□□□ 0.35
CCL4P13236 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms