Protein–RNA interactions for Protein: P12035

KRT3, Keratin, type II cytoskeletal 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT3P12035 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
KRT3P12035 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
KRT3P12035 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
KRT3P12035 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
KRT3P12035 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC19.32■□□□□ 0.68
KRT3P12035 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
KRT3P12035 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
KRT3P12035 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC19.32■□□□□ 0.68
KRT3P12035 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC19.31■□□□□ 0.68
KRT3P12035 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
KRT3P12035 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
KRT3P12035 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
KRT3P12035 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
KRT3P12035 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
KRT3P12035 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
KRT3P12035 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
KRT3P12035 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
KRT3P12035 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC19.31■□□□□ 0.68
KRT3P12035 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC19.31■□□□□ 0.68
KRT3P12035 AP000523.1-201ENST00000398242 1049 ntBASIC19.31■□□□□ 0.68
KRT3P12035 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC19.31■□□□□ 0.68
KRT3P12035 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC19.31■□□□□ 0.68
KRT3P12035 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
KRT3P12035 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC19.31■□□□□ 0.68
KRT3P12035 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC19.31■□□□□ 0.68
KRT3P12035 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC19.31■□□□□ 0.68
KRT3P12035 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
KRT3P12035 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
KRT3P12035 AL138966.2-201ENST00000621997 464 ntBASIC19.31■□□□□ 0.68
KRT3P12035 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC19.31■□□□□ 0.68
KRT3P12035 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
KRT3P12035 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
KRT3P12035 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC19.31■□□□□ 0.68
KRT3P12035 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
KRT3P12035 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
KRT3P12035 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
KRT3P12035 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
KRT3P12035 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
KRT3P12035 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
KRT3P12035 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
KRT3P12035 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
KRT3P12035 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC19.3■□□□□ 0.68
KRT3P12035 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
KRT3P12035 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
KRT3P12035 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC19.3■□□□□ 0.68
KRT3P12035 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
KRT3P12035 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
KRT3P12035 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
KRT3P12035 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC19.3■□□□□ 0.68
KRT3P12035 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
KRT3P12035 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC19.3■□□□□ 0.68
KRT3P12035 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC19.3■□□□□ 0.68
KRT3P12035 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC19.3■□□□□ 0.68
KRT3P12035 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
KRT3P12035 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC19.3■□□□□ 0.68
KRT3P12035 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC19.3■□□□□ 0.68
KRT3P12035 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
KRT3P12035 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
KRT3P12035 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC19.3■□□□□ 0.68
KRT3P12035 LIN28AP1-201ENST00000429574 405 ntBASIC19.3■□□□□ 0.68
KRT3P12035 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC19.3■□□□□ 0.68
KRT3P12035 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC19.3■□□□□ 0.68
KRT3P12035 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC19.3■□□□□ 0.68
KRT3P12035 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC19.3■□□□□ 0.68
KRT3P12035 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
KRT3P12035 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC19.3■□□□□ 0.68
KRT3P12035 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
KRT3P12035 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
KRT3P12035 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
KRT3P12035 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
KRT3P12035 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
KRT3P12035 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
KRT3P12035 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
KRT3P12035 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
KRT3P12035 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
KRT3P12035 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
KRT3P12035 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC19.29■□□□□ 0.68
KRT3P12035 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC19.29■□□□□ 0.68
KRT3P12035 AC010203.1-204ENST00000548782 407 ntBASIC19.29■□□□□ 0.68
KRT3P12035 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC19.29■□□□□ 0.68
KRT3P12035 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC19.29■□□□□ 0.68
KRT3P12035 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC19.29■□□□□ 0.68
KRT3P12035 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
KRT3P12035 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
KRT3P12035 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
KRT3P12035 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
KRT3P12035 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
KRT3P12035 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
KRT3P12035 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC19.29■□□□□ 0.68
KRT3P12035 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
KRT3P12035 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
KRT3P12035 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC19.29■□□□□ 0.68
KRT3P12035 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
KRT3P12035 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
KRT3P12035 FLYWCH1P1-201ENST00000460917 1874 ntBASIC19.28■□□□□ 0.68
KRT3P12035 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
KRT3P12035 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC19.28■□□□□ 0.68
KRT3P12035 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
KRT3P12035 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
KRT3P12035 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 112.5 ms