Protein–RNA interactions for Protein: P0DL12

SMIM17, Small integral membrane protein 17, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM17P0DL12 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SMIM17P0DL12 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC13.66□□□□□ -0.22
SMIM17P0DL12 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC13.66□□□□□ -0.22
SMIM17P0DL12 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
SMIM17P0DL12 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SMIM17P0DL12 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
SMIM17P0DL12 MIR663A-201ENST00000385250 93 ntBASIC13.66□□□□□ -0.22
SMIM17P0DL12 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC13.66□□□□□ -0.22
SMIM17P0DL12 SLC29A4P1-201ENST00000398760 971 ntBASIC13.66□□□□□ -0.22
SMIM17P0DL12 MIPEPP3-201ENST00000412105 444 ntBASIC13.66□□□□□ -0.22
SMIM17P0DL12 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC13.66□□□□□ -0.22
SMIM17P0DL12 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC13.66□□□□□ -0.22
SMIM17P0DL12 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC13.66□□□□□ -0.22
SMIM17P0DL12 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC13.66□□□□□ -0.22
SMIM17P0DL12 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC13.66□□□□□ -0.22
SMIM17P0DL12 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC13.66□□□□□ -0.22
SMIM17P0DL12 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SMIM17P0DL12 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC13.66□□□□□ -0.22
SMIM17P0DL12 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SMIM17P0DL12 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
SMIM17P0DL12 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
SMIM17P0DL12 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC13.66□□□□□ -0.22
SMIM17P0DL12 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC13.66□□□□□ -0.22
SMIM17P0DL12 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
SMIM17P0DL12 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SMIM17P0DL12 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
SMIM17P0DL12 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
SMIM17P0DL12 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
SMIM17P0DL12 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
SMIM17P0DL12 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
SMIM17P0DL12 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
SMIM17P0DL12 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SMIM17P0DL12 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SMIM17P0DL12 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
SMIM17P0DL12 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SMIM17P0DL12 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
SMIM17P0DL12 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
SMIM17P0DL12 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC13.65□□□□□ -0.22
SMIM17P0DL12 BOC-212ENST00000485230 2173 ntTSL 2 BASIC13.65□□□□□ -0.22
SMIM17P0DL12 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
SMIM17P0DL12 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
SMIM17P0DL12 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SMIM17P0DL12 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
SMIM17P0DL12 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC13.65□□□□□ -0.22
SMIM17P0DL12 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC13.65□□□□□ -0.22
SMIM17P0DL12 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
SMIM17P0DL12 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
SMIM17P0DL12 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
SMIM17P0DL12 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
SMIM17P0DL12 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SMIM17P0DL12 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC13.65□□□□□ -0.22
SMIM17P0DL12 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SMIM17P0DL12 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC13.65□□□□□ -0.22
SMIM17P0DL12 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC13.65□□□□□ -0.22
SMIM17P0DL12 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC13.65□□□□□ -0.22
SMIM17P0DL12 OR2A1-AS1-207ENST00000486094 819 ntBASIC13.65□□□□□ -0.22
SMIM17P0DL12 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC13.65□□□□□ -0.22
SMIM17P0DL12 PRKY-204ENST00000533551 1019 ntBASIC13.65□□□□□ -0.22
SMIM17P0DL12 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
SMIM17P0DL12 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC13.65□□□□□ -0.22
SMIM17P0DL12 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
SMIM17P0DL12 MARS-234ENST00000630571 216 ntTSL 5 BASIC13.65□□□□□ -0.22
SMIM17P0DL12 MARS-235ENST00000630803 183 ntTSL 3 BASIC13.65□□□□□ -0.22
SMIM17P0DL12 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SMIM17P0DL12 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SMIM17P0DL12 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
SMIM17P0DL12 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC13.65□□□□□ -0.22
SMIM17P0DL12 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
SMIM17P0DL12 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
SMIM17P0DL12 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
SMIM17P0DL12 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC13.65□□□□□ -0.22
SMIM17P0DL12 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC13.64□□□□□ -0.23
SMIM17P0DL12 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC13.64□□□□□ -0.23
SMIM17P0DL12 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SMIM17P0DL12 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SMIM17P0DL12 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
SMIM17P0DL12 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC13.64□□□□□ -0.23
SMIM17P0DL12 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
SMIM17P0DL12 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
SMIM17P0DL12 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
SMIM17P0DL12 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
SMIM17P0DL12 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
SMIM17P0DL12 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC13.64□□□□□ -0.23
SMIM17P0DL12 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
SMIM17P0DL12 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
SMIM17P0DL12 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC13.64□□□□□ -0.23
SMIM17P0DL12 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
SMIM17P0DL12 AC008764.6-201ENST00000595909 2069 ntBASIC13.64□□□□□ -0.23
SMIM17P0DL12 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC13.64□□□□□ -0.23
SMIM17P0DL12 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
SMIM17P0DL12 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC13.64□□□□□ -0.23
SMIM17P0DL12 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC13.64□□□□□ -0.23
SMIM17P0DL12 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
SMIM17P0DL12 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC13.64□□□□□ -0.23
SMIM17P0DL12 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC13.64□□□□□ -0.23
SMIM17P0DL12 AC026185.1-201ENST00000445748 174 ntBASIC13.64□□□□□ -0.23
SMIM17P0DL12 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC13.64□□□□□ -0.23
SMIM17P0DL12 AC097658.1-201ENST00000475555 843 ntBASIC13.64□□□□□ -0.23
SMIM17P0DL12 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC13.64□□□□□ -0.23
SMIM17P0DL12 AC091874.3-201ENST00000512672 1195 ntBASIC13.64□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms