Protein–RNA interactions for Protein: P09486

SPARC, SPARC, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPARCP09486 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC16.34■□□□□ 0.21
SPARCP09486 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC16.34■□□□□ 0.21
SPARCP09486 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC16.34■□□□□ 0.21
SPARCP09486 REXO1L10P-201ENST00000615707 1290 ntBASIC16.34■□□□□ 0.21
SPARCP09486 REXO1L12P-201ENST00000622156 912 ntBASIC16.34■□□□□ 0.21
SPARCP09486 AL049637.2-201ENST00000641778 930 ntBASIC16.34■□□□□ 0.21
SPARCP09486 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SPARCP09486 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
SPARCP09486 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SPARCP09486 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SPARCP09486 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SPARCP09486 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SPARCP09486 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC16.34■□□□□ 0.21
SPARCP09486 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SPARCP09486 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SPARCP09486 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
SPARCP09486 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SPARCP09486 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
SPARCP09486 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
SPARCP09486 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
SPARCP09486 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
SPARCP09486 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
SPARCP09486 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC16.33■□□□□ 0.21
SPARCP09486 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC16.33■□□□□ 0.21
SPARCP09486 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC16.33■□□□□ 0.21
SPARCP09486 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC16.33■□□□□ 0.21
SPARCP09486 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC16.33■□□□□ 0.2
SPARCP09486 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC16.33■□□□□ 0.2
SPARCP09486 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SPARCP09486 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
SPARCP09486 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SPARCP09486 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
SPARCP09486 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SPARCP09486 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC16.33■□□□□ 0.2
SPARCP09486 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SPARCP09486 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC16.33■□□□□ 0.2
SPARCP09486 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SPARCP09486 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC16.33■□□□□ 0.2
SPARCP09486 AC233702.5-201ENST00000584107 538 ntBASIC16.33■□□□□ 0.2
SPARCP09486 GRAMD4P8-201ENST00000605465 1115 ntBASIC16.33■□□□□ 0.2
SPARCP09486 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
SPARCP09486 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC16.33■□□□□ 0.2
SPARCP09486 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC16.33■□□□□ 0.2
SPARCP09486 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SPARCP09486 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
SPARCP09486 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SPARCP09486 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC16.33■□□□□ 0.2
SPARCP09486 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
SPARCP09486 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SPARCP09486 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SPARCP09486 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
SPARCP09486 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SPARCP09486 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
SPARCP09486 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SPARCP09486 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SPARCP09486 REXO1L9P-201ENST00000604264 2108 ntBASIC16.33■□□□□ 0.2
SPARCP09486 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SPARCP09486 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
SPARCP09486 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SPARCP09486 AC099343.3-201ENST00000605834 2503 ntBASIC16.33■□□□□ 0.2
SPARCP09486 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SPARCP09486 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
SPARCP09486 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SPARCP09486 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
SPARCP09486 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SPARCP09486 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC16.32■□□□□ 0.2
SPARCP09486 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC16.32■□□□□ 0.2
SPARCP09486 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SPARCP09486 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
SPARCP09486 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
SPARCP09486 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SPARCP09486 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SPARCP09486 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SPARCP09486 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SPARCP09486 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
SPARCP09486 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SPARCP09486 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SPARCP09486 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
SPARCP09486 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
SPARCP09486 CA15P1-201ENST00000481698 905 ntBASIC16.32■□□□□ 0.2
SPARCP09486 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SPARCP09486 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SPARCP09486 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SPARCP09486 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SPARCP09486 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC16.32■□□□□ 0.2
SPARCP09486 MIR3180-5-201ENST00000583743 153 ntBASIC16.32■□□□□ 0.2
SPARCP09486 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC16.32■□□□□ 0.2
SPARCP09486 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SPARCP09486 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SPARCP09486 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
SPARCP09486 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SPARCP09486 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SPARCP09486 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SPARCP09486 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SPARCP09486 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC16.31■□□□□ 0.2
SPARCP09486 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SPARCP09486 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC16.31■□□□□ 0.2
SPARCP09486 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SPARCP09486 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SPARCP09486 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms