Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC18.99■□□□□ 0.63
CD48P09326 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CD48P09326 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC18.99■□□□□ 0.63
CD48P09326 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC18.99■□□□□ 0.63
CD48P09326 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC18.99■□□□□ 0.63
CD48P09326 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC18.99■□□□□ 0.63
CD48P09326 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC18.99■□□□□ 0.63
CD48P09326 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC18.99■□□□□ 0.63
CD48P09326 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC18.99■□□□□ 0.63
CD48P09326 AL138966.2-201ENST00000621997 464 ntBASIC18.99■□□□□ 0.63
CD48P09326 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
CD48P09326 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CD48P09326 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
CD48P09326 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC18.99■□□□□ 0.63
CD48P09326 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
CD48P09326 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CD48P09326 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CD48P09326 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CD48P09326 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CD48P09326 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
CD48P09326 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CD48P09326 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC18.98■□□□□ 0.63
CD48P09326 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CD48P09326 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CD48P09326 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CD48P09326 SP100-208ENST00000427101 1922 ntTSL 2 BASIC18.98■□□□□ 0.63
CD48P09326 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CD48P09326 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CD48P09326 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CD48P09326 GAD2-202ENST00000376248 680 ntTSL 5 BASIC18.98■□□□□ 0.63
CD48P09326 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CD48P09326 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CD48P09326 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CD48P09326 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CD48P09326 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC18.98■□□□□ 0.63
CD48P09326 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CD48P09326 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC18.98■□□□□ 0.63
CD48P09326 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CD48P09326 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CD48P09326 SLC25A3P1-201ENST00000443844 931 ntBASIC18.98■□□□□ 0.63
CD48P09326 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CD48P09326 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CD48P09326 RPS20-210ENST00000523936 899 ntTSL 2 BASIC18.98■□□□□ 0.63
CD48P09326 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC18.98■□□□□ 0.63
CD48P09326 AC010203.1-204ENST00000548782 407 ntBASIC18.98■□□□□ 0.63
CD48P09326 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CD48P09326 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
CD48P09326 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CD48P09326 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC18.98■□□□□ 0.63
CD48P09326 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
CD48P09326 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CD48P09326 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC18.98■□□□□ 0.63
CD48P09326 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CD48P09326 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC18.97■□□□□ 0.63
CD48P09326 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC18.97■□□□□ 0.63
CD48P09326 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CD48P09326 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CD48P09326 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
CD48P09326 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC18.97■□□□□ 0.63
CD48P09326 CD70-202ENST00000423145 881 ntTSL 2 BASIC18.97■□□□□ 0.63
CD48P09326 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC18.97■□□□□ 0.63
CD48P09326 GPX4-207ENST00000589115 812 ntTSL 2 BASIC18.97■□□□□ 0.63
CD48P09326 AC012306.2-201ENST00000609350 630 ntBASIC18.97■□□□□ 0.63
CD48P09326 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CD48P09326 AC141257.4-201ENST00000634557 245 ntBASIC18.97■□□□□ 0.63
CD48P09326 AC136944.6-201ENST00000634818 245 ntBASIC18.97■□□□□ 0.63
CD48P09326 AC133561.5-201ENST00000635547 218 ntBASIC18.97■□□□□ 0.63
CD48P09326 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CD48P09326 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CD48P09326 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CD48P09326 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC18.97■□□□□ 0.63
CD48P09326 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
CD48P09326 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CD48P09326 PCDHB18P-201ENST00000524813 2368 ntBASIC18.97■□□□□ 0.63
CD48P09326 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CD48P09326 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
CD48P09326 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CD48P09326 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CD48P09326 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
CD48P09326 AP000997.3-201ENST00000623333 2250 ntBASIC18.97■□□□□ 0.63
CD48P09326 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC18.96■□□□□ 0.63
CD48P09326 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CD48P09326 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
CD48P09326 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CD48P09326 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
CD48P09326 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CD48P09326 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CD48P09326 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CD48P09326 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CD48P09326 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
CD48P09326 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CD48P09326 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CD48P09326 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CD48P09326 NEK4P2-201ENST00000580004 1012 ntBASIC18.96■□□□□ 0.63
CD48P09326 MIR3180-4-201ENST00000582223 153 ntBASIC18.96■□□□□ 0.63
CD48P09326 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CD48P09326 PODN-203ENST00000395871 2744 ntTSL 5 BASIC18.96■□□□□ 0.63
CD48P09326 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CD48P09326 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CD48P09326 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms