Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
APOBP04114 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC11.38□□□□□ -0.59
APOBP04114 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
APOBP04114 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
APOBP04114 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
APOBP04114 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
APOBP04114 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
APOBP04114 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
APOBP04114 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
APOBP04114 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC11.37□□□□□ -0.59
APOBP04114 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
APOBP04114 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC11.37□□□□□ -0.59
APOBP04114 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
APOBP04114 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC11.37□□□□□ -0.59
APOBP04114 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
APOBP04114 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
APOBP04114 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
APOBP04114 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
APOBP04114 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC11.37□□□□□ -0.59
APOBP04114 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
APOBP04114 UBQLN4P1-201ENST00000461599 1801 ntBASIC11.37□□□□□ -0.59
APOBP04114 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
APOBP04114 PUS1-205ENST00000535067 838 ntTSL 3 BASIC11.37□□□□□ -0.59
APOBP04114 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC11.37□□□□□ -0.59
APOBP04114 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC11.37□□□□□ -0.59
APOBP04114 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC11.37□□□□□ -0.59
APOBP04114 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC11.37□□□□□ -0.59
APOBP04114 PON3-203ENST00000427422 894 ntTSL 3 BASIC11.37□□□□□ -0.59
APOBP04114 AC005593.1-201ENST00000624894 515 ntBASIC11.37□□□□□ -0.59
APOBP04114 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
APOBP04114 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
APOBP04114 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
APOBP04114 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
APOBP04114 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
APOBP04114 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC11.36□□□□□ -0.59
APOBP04114 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC11.36□□□□□ -0.59
APOBP04114 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC11.36□□□□□ -0.59
APOBP04114 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
APOBP04114 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC11.36□□□□□ -0.59
APOBP04114 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC11.36□□□□□ -0.59
APOBP04114 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
APOBP04114 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC11.36□□□□□ -0.59
APOBP04114 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC11.36□□□□□ -0.59
APOBP04114 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC11.36□□□□□ -0.59
APOBP04114 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
APOBP04114 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
APOBP04114 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC11.36□□□□□ -0.59
APOBP04114 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
APOBP04114 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
APOBP04114 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
APOBP04114 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
APOBP04114 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
APOBP04114 AC007967.3-201ENST00000434308 558 ntBASIC11.36□□□□□ -0.59
APOBP04114 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
APOBP04114 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC11.36□□□□□ -0.59
APOBP04114 AC190387.1-201ENST00000551683 408 ntBASIC11.36□□□□□ -0.59
APOBP04114 ETFA-208ENST00000559602 792 ntTSL 3 BASIC11.36□□□□□ -0.59
APOBP04114 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC11.36□□□□□ -0.59
APOBP04114 INO80C-206ENST00000586489 594 ntTSL 3 BASIC11.36□□□□□ -0.59
APOBP04114 SDHAP2-201ENST00000455183 2001 ntBASIC11.36□□□□□ -0.59
APOBP04114 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC11.36□□□□□ -0.59
APOBP04114 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
APOBP04114 ASL-204ENST00000395331 1538 ntTSL 5 BASIC11.36□□□□□ -0.59
APOBP04114 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
APOBP04114 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
APOBP04114 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
APOBP04114 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
APOBP04114 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC11.36□□□□□ -0.59
APOBP04114 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
APOBP04114 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
APOBP04114 AC005498.2-205ENST00000593218 784 ntBASIC11.36□□□□□ -0.59
APOBP04114 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
APOBP04114 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
APOBP04114 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
APOBP04114 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
APOBP04114 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
APOBP04114 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
APOBP04114 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC11.36□□□□□ -0.59
APOBP04114 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
APOBP04114 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
APOBP04114 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
APOBP04114 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
APOBP04114 SYS1-203ENST00000414310 795 ntTSL 3 BASIC11.36□□□□□ -0.59
APOBP04114 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC11.36□□□□□ -0.59
APOBP04114 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
APOBP04114 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC11.36□□□□□ -0.59
APOBP04114 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC11.36□□□□□ -0.59
APOBP04114 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
APOBP04114 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
APOBP04114 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC11.35□□□□□ -0.59
APOBP04114 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
APOBP04114 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
APOBP04114 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
APOBP04114 IGLL3P-201ENST00000412472 434 ntBASIC11.35□□□□□ -0.59
APOBP04114 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
APOBP04114 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC11.35□□□□□ -0.59
APOBP04114 AC138761.1-201ENST00000584393 385 ntBASIC11.35□□□□□ -0.59
APOBP04114 AL024508.2-201ENST00000607749 1894 ntBASIC11.35□□□□□ -0.59
APOBP04114 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
APOBP04114 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms