Protein–RNA interactions for Protein: O95477

ABCA1, ATP-binding cassette sub-family A member 1, humanhuman

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1O95477 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
ABCA1O95477 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
ABCA1O95477 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
ABCA1O95477 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC15.33■□□□□ 0.05
ABCA1O95477 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.05
ABCA1O95477 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC15.33■□□□□ 0.05
ABCA1O95477 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC15.33■□□□□ 0.05
ABCA1O95477 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
ABCA1O95477 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
ABCA1O95477 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
ABCA1O95477 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC15.33■□□□□ 0.05
ABCA1O95477 KRT18P13-201ENST00000400056 1290 ntBASIC15.33■□□□□ 0.05
ABCA1O95477 SAPCD2P3-201ENST00000455031 850 ntBASIC15.33■□□□□ 0.05
ABCA1O95477 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC15.33■□□□□ 0.05
ABCA1O95477 AC099336.1-202ENST00000602961 463 ntBASIC15.33■□□□□ 0.05
ABCA1O95477 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC15.33■□□□□ 0.05
ABCA1O95477 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.05
ABCA1O95477 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
ABCA1O95477 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC15.33■□□□□ 0.05
ABCA1O95477 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
ABCA1O95477 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC15.33■□□□□ 0.04
ABCA1O95477 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC15.33■□□□□ 0.04
ABCA1O95477 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
ABCA1O95477 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC15.33■□□□□ 0.04
ABCA1O95477 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
ABCA1O95477 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
ABCA1O95477 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
ABCA1O95477 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC15.33■□□□□ 0.04
ABCA1O95477 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
ABCA1O95477 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
ABCA1O95477 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC15.33■□□□□ 0.04
ABCA1O95477 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
ABCA1O95477 COX10-202ENST00000429152 875 ntTSL 2 BASIC15.33■□□□□ 0.04
ABCA1O95477 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
ABCA1O95477 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.04
ABCA1O95477 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
ABCA1O95477 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
ABCA1O95477 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC15.33■□□□□ 0.04
ABCA1O95477 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
ABCA1O95477 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
ABCA1O95477 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
ABCA1O95477 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
ABCA1O95477 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ABCA1O95477 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC15.32■□□□□ 0.04
ABCA1O95477 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC15.32■□□□□ 0.04
ABCA1O95477 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ABCA1O95477 AKR1C7P-201ENST00000305623 895 ntBASIC15.32■□□□□ 0.04
ABCA1O95477 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ABCA1O95477 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
ABCA1O95477 KRT18P23-201ENST00000435622 1283 ntBASIC15.32■□□□□ 0.04
ABCA1O95477 VENTXP7-201ENST00000475503 772 ntBASIC15.32■□□□□ 0.04
ABCA1O95477 POLD2P1-201ENST00000511220 997 ntBASIC15.32■□□□□ 0.04
ABCA1O95477 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ABCA1O95477 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC15.32■□□□□ 0.04
ABCA1O95477 AL592071.1-201ENST00000611956 408 ntBASIC15.32■□□□□ 0.04
ABCA1O95477 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ABCA1O95477 IL9RP2-201ENST00000423948 1312 ntBASIC15.32■□□□□ 0.04
ABCA1O95477 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
ABCA1O95477 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ABCA1O95477 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ABCA1O95477 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC15.32■□□□□ 0.04
ABCA1O95477 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
ABCA1O95477 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
ABCA1O95477 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
ABCA1O95477 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
ABCA1O95477 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ABCA1O95477 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ABCA1O95477 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ABCA1O95477 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
ABCA1O95477 PPIE-208ENST00000470213 927 ntTSL 3 BASIC15.32■□□□□ 0.04
ABCA1O95477 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC15.32■□□□□ 0.04
ABCA1O95477 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC15.32■□□□□ 0.04
ABCA1O95477 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC15.32■□□□□ 0.04
ABCA1O95477 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ABCA1O95477 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC15.32■□□□□ 0.04
ABCA1O95477 AC010240.3-201ENST00000607688 395 ntBASIC15.32■□□□□ 0.04
ABCA1O95477 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
ABCA1O95477 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
ABCA1O95477 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
ABCA1O95477 KRT8P7-201ENST00000533003 1432 ntBASIC15.31■□□□□ 0.04
ABCA1O95477 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
ABCA1O95477 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ABCA1O95477 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
ABCA1O95477 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
ABCA1O95477 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
ABCA1O95477 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
ABCA1O95477 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC15.31■□□□□ 0.04
ABCA1O95477 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC15.31■□□□□ 0.04
ABCA1O95477 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
ABCA1O95477 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC15.31■□□□□ 0.04
ABCA1O95477 RPP21-221ENST00000428040 594 ntTSL 2 BASIC15.31■□□□□ 0.04
ABCA1O95477 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ABCA1O95477 FAM197Y8-203ENST00000450145 560 ntBASIC15.31■□□□□ 0.04
ABCA1O95477 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC15.31■□□□□ 0.04
ABCA1O95477 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
ABCA1O95477 AP005901.3-202ENST00000581653 237 ntBASIC15.31■□□□□ 0.04
ABCA1O95477 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ABCA1O95477 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
ABCA1O95477 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
ABCA1O95477 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms