Protein–RNA interactions for Protein: O60890

OPHN1, Oligophrenin-1, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPHN1O60890 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC19.13■□□□□ 0.65
OPHN1O60890 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
OPHN1O60890 AL357033.4-201ENST00000617703 1807 ntBASIC19.13■□□□□ 0.65
OPHN1O60890 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC19.13■□□□□ 0.65
OPHN1O60890 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
OPHN1O60890 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
OPHN1O60890 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
OPHN1O60890 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
OPHN1O60890 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
OPHN1O60890 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC19.12■□□□□ 0.65
OPHN1O60890 AC126763.1-201ENST00000552015 2118 ntBASIC19.12■□□□□ 0.65
OPHN1O60890 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
OPHN1O60890 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
OPHN1O60890 EFTUD1P1-204ENST00000560401 1798 ntBASIC19.12■□□□□ 0.65
OPHN1O60890 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
OPHN1O60890 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
OPHN1O60890 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
OPHN1O60890 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC19.12■□□□□ 0.65
OPHN1O60890 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
OPHN1O60890 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
OPHN1O60890 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
OPHN1O60890 AL450487.1-201ENST00000426799 995 ntBASIC19.12■□□□□ 0.65
OPHN1O60890 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC19.12■□□□□ 0.65
OPHN1O60890 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
OPHN1O60890 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
OPHN1O60890 BCL2-203ENST00000589955 5011 ntBASIC19.12■□□□□ 0.65
OPHN1O60890 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
OPHN1O60890 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
OPHN1O60890 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
OPHN1O60890 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC19.12■□□□□ 0.65
OPHN1O60890 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
OPHN1O60890 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
OPHN1O60890 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
OPHN1O60890 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
OPHN1O60890 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
OPHN1O60890 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
OPHN1O60890 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
OPHN1O60890 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
OPHN1O60890 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
OPHN1O60890 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC19.11■□□□□ 0.65
OPHN1O60890 AL109659.2-201ENST00000606809 1674 ntBASIC19.11■□□□□ 0.65
OPHN1O60890 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
OPHN1O60890 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
OPHN1O60890 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
OPHN1O60890 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
OPHN1O60890 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
OPHN1O60890 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
OPHN1O60890 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
OPHN1O60890 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC19.11■□□□□ 0.65
OPHN1O60890 AC135050.7-201ENST00000624508 2218 ntBASIC19.11■□□□□ 0.65
OPHN1O60890 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC19.11■□□□□ 0.65
OPHN1O60890 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
OPHN1O60890 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
OPHN1O60890 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
OPHN1O60890 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
OPHN1O60890 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
OPHN1O60890 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
OPHN1O60890 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC19.11■□□□□ 0.65
OPHN1O60890 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC19.11■□□□□ 0.65
OPHN1O60890 TSPY17P-201ENST00000450329 467 ntBASIC19.11■□□□□ 0.65
OPHN1O60890 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
OPHN1O60890 GXYLT1P6-201ENST00000456472 1187 ntBASIC19.11■□□□□ 0.65
OPHN1O60890 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC19.11■□□□□ 0.65
OPHN1O60890 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC19.11■□□□□ 0.65
OPHN1O60890 AC140113.3-201ENST00000605663 199 ntBASIC19.11■□□□□ 0.65
OPHN1O60890 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC19.11■□□□□ 0.65
OPHN1O60890 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC19.11■□□□□ 0.65
OPHN1O60890 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
OPHN1O60890 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
OPHN1O60890 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
OPHN1O60890 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
OPHN1O60890 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
OPHN1O60890 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
OPHN1O60890 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC19.11■□□□□ 0.65
OPHN1O60890 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
OPHN1O60890 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
OPHN1O60890 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
OPHN1O60890 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
OPHN1O60890 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC19.11■□□□□ 0.65
OPHN1O60890 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
OPHN1O60890 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC19.1■□□□□ 0.65
OPHN1O60890 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC19.1■□□□□ 0.65
OPHN1O60890 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
OPHN1O60890 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC19.1■□□□□ 0.65
OPHN1O60890 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
OPHN1O60890 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC19.1■□□□□ 0.65
OPHN1O60890 AC112777.1-201ENST00000540175 1423 ntBASIC19.1■□□□□ 0.65
OPHN1O60890 AC092338.2-201ENST00000568827 1415 ntBASIC19.1■□□□□ 0.65
OPHN1O60890 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC19.1■□□□□ 0.65
OPHN1O60890 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC19.1■□□□□ 0.65
OPHN1O60890 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
OPHN1O60890 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
OPHN1O60890 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
OPHN1O60890 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
OPHN1O60890 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
OPHN1O60890 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
OPHN1O60890 SPATA22-202ENST00000355380 1216 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
OPHN1O60890 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
OPHN1O60890 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
OPHN1O60890 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms