Protein–RNA interactions for Protein: O60245

PCDH7, Protocadherin-7, humanhuman

Predictions only

Length 1,069 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH7O60245 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
PCDH7O60245 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC17.52■□□□□ 0.39
PCDH7O60245 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
PCDH7O60245 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
PCDH7O60245 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC17.52■□□□□ 0.39
PCDH7O60245 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
PCDH7O60245 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC17.51■□□□□ 0.39
PCDH7O60245 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC17.51■□□□□ 0.39
PCDH7O60245 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PCDH7O60245 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDH7O60245 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDH7O60245 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDH7O60245 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PCDH7O60245 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDH7O60245 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
PCDH7O60245 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDH7O60245 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDH7O60245 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDH7O60245 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDH7O60245 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PCDH7O60245 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDH7O60245 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PCDH7O60245 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDH7O60245 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDH7O60245 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDH7O60245 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC17.51■□□□□ 0.39
PCDH7O60245 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
PCDH7O60245 CD276-203ENST00000537340 2439 ntTSL 2 BASIC17.51■□□□□ 0.39
PCDH7O60245 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PCDH7O60245 PCDHB18P-201ENST00000524813 2368 ntBASIC17.51■□□□□ 0.39
PCDH7O60245 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
PCDH7O60245 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC17.51■□□□□ 0.39
PCDH7O60245 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
PCDH7O60245 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDH7O60245 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PCDH7O60245 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PCDH7O60245 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC17.5■□□□□ 0.39
PCDH7O60245 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDH7O60245 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PCDH7O60245 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDH7O60245 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC17.5■□□□□ 0.39
PCDH7O60245 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDH7O60245 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PCDH7O60245 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PCDH7O60245 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
PCDH7O60245 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDH7O60245 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDH7O60245 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC17.5■□□□□ 0.39
PCDH7O60245 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PCDH7O60245 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PCDH7O60245 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC17.5■□□□□ 0.39
PCDH7O60245 AC009065.1-201ENST00000564055 1225 ntBASIC17.5■□□□□ 0.39
PCDH7O60245 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC17.5■□□□□ 0.39
PCDH7O60245 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDH7O60245 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDH7O60245 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
PCDH7O60245 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PCDH7O60245 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDH7O60245 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PCDH7O60245 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
PCDH7O60245 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
PCDH7O60245 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDH7O60245 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDH7O60245 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC17.5■□□□□ 0.39
PCDH7O60245 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDH7O60245 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDH7O60245 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
PCDH7O60245 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PCDH7O60245 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
PCDH7O60245 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC17.5■□□□□ 0.39
PCDH7O60245 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PCDH7O60245 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
PCDH7O60245 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
PCDH7O60245 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC17.49■□□□□ 0.39
PCDH7O60245 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC17.49■□□□□ 0.39
PCDH7O60245 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PCDH7O60245 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC17.49■□□□□ 0.39
PCDH7O60245 AL596275.1-201ENST00000423464 877 ntBASIC17.49■□□□□ 0.39
PCDH7O60245 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC17.49■□□□□ 0.39
PCDH7O60245 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC17.49■□□□□ 0.39
PCDH7O60245 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC17.49■□□□□ 0.39
PCDH7O60245 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC17.49■□□□□ 0.39
PCDH7O60245 AC104390.1-201ENST00000555663 520 ntBASIC17.49■□□□□ 0.39
PCDH7O60245 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC17.49■□□□□ 0.39
PCDH7O60245 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PCDH7O60245 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC17.49■□□□□ 0.39
PCDH7O60245 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PCDH7O60245 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC17.49■□□□□ 0.39
PCDH7O60245 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PCDH7O60245 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PCDH7O60245 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC17.49■□□□□ 0.39
PCDH7O60245 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
PCDH7O60245 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
PCDH7O60245 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
PCDH7O60245 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC17.48■□□□□ 0.39
PCDH7O60245 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC17.48■□□□□ 0.39
PCDH7O60245 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC17.48■□□□□ 0.39
PCDH7O60245 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
PCDH7O60245 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
PCDH7O60245 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms