Protein–RNA interactions for Protein: O14617

AP3D1, AP-3 complex subunit delta-1, humanhuman

Predictions only

Length 1,153 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3D1O14617 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
AP3D1O14617 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
AP3D1O14617 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
AP3D1O14617 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
AP3D1O14617 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
AP3D1O14617 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
AP3D1O14617 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
AP3D1O14617 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
AP3D1O14617 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
AP3D1O14617 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
AP3D1O14617 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
AP3D1O14617 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
AP3D1O14617 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC17.16■□□□□ 0.34
AP3D1O14617 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
AP3D1O14617 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC17.16■□□□□ 0.34
AP3D1O14617 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
AP3D1O14617 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
AP3D1O14617 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
AP3D1O14617 KRT8P45-201ENST00000414328 1447 ntBASIC17.16■□□□□ 0.34
AP3D1O14617 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
AP3D1O14617 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
AP3D1O14617 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
AP3D1O14617 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC17.16■□□□□ 0.34
AP3D1O14617 SNORA78-201ENST00000459373 127 ntBASIC17.16■□□□□ 0.34
AP3D1O14617 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC17.16■□□□□ 0.34
AP3D1O14617 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
AP3D1O14617 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
AP3D1O14617 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC17.16■□□□□ 0.34
AP3D1O14617 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
AP3D1O14617 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
AP3D1O14617 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
AP3D1O14617 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
AP3D1O14617 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
AP3D1O14617 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
AP3D1O14617 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC17.15■□□□□ 0.34
AP3D1O14617 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
AP3D1O14617 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
AP3D1O14617 AC067852.2-201ENST00000590513 2313 ntBASIC17.15■□□□□ 0.34
AP3D1O14617 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC17.15■□□□□ 0.34
AP3D1O14617 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
AP3D1O14617 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
AP3D1O14617 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
AP3D1O14617 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
AP3D1O14617 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
AP3D1O14617 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
AP3D1O14617 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
AP3D1O14617 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
AP3D1O14617 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
AP3D1O14617 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
AP3D1O14617 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
AP3D1O14617 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
AP3D1O14617 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC17.15■□□□□ 0.34
AP3D1O14617 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
AP3D1O14617 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC17.15■□□□□ 0.34
AP3D1O14617 RBM17P1-201ENST00000453646 1190 ntBASIC17.15■□□□□ 0.34
AP3D1O14617 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC17.15■□□□□ 0.34
AP3D1O14617 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
AP3D1O14617 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
AP3D1O14617 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
AP3D1O14617 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
AP3D1O14617 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
AP3D1O14617 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
AP3D1O14617 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
AP3D1O14617 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC17.15■□□□□ 0.34
AP3D1O14617 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
AP3D1O14617 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
AP3D1O14617 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC17.15■□□□□ 0.34
AP3D1O14617 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
AP3D1O14617 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC17.15■□□□□ 0.34
AP3D1O14617 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
AP3D1O14617 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC17.15■□□□□ 0.34
AP3D1O14617 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
AP3D1O14617 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC17.14■□□□□ 0.33
AP3D1O14617 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC17.14■□□□□ 0.33
AP3D1O14617 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC17.14■□□□□ 0.33
AP3D1O14617 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
AP3D1O14617 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
AP3D1O14617 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
AP3D1O14617 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC17.14■□□□□ 0.33
AP3D1O14617 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
AP3D1O14617 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
AP3D1O14617 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
AP3D1O14617 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
AP3D1O14617 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
AP3D1O14617 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC17.14■□□□□ 0.33
AP3D1O14617 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC17.14■□□□□ 0.33
AP3D1O14617 AP006294.2-201ENST00000641667 209 ntBASIC17.14■□□□□ 0.33
AP3D1O14617 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
AP3D1O14617 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
AP3D1O14617 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC17.14■□□□□ 0.33
AP3D1O14617 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
AP3D1O14617 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC17.13■□□□□ 0.33
AP3D1O14617 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
AP3D1O14617 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
AP3D1O14617 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
AP3D1O14617 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
AP3D1O14617 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC17.13■□□□□ 0.33
AP3D1O14617 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC17.13■□□□□ 0.33
AP3D1O14617 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC17.13■□□□□ 0.33
AP3D1O14617 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC17.13■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms