Protein–RNA interactions for Protein: O00442

RTCA, RNA 3'-terminal phosphate cyclase, humanhuman

Known RBP Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCAO00442 ARL16-209ENST00000573715 763 ntTSL 3 BASIC17.5■□□□□ 0.39
RTCAO00442 ARL16-211ENST00000576135 694 ntTSL 3 BASIC17.5■□□□□ 0.39
RTCAO00442 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RTCAO00442 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
RTCAO00442 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC17.5■□□□□ 0.39
RTCAO00442 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RTCAO00442 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
RTCAO00442 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC17.5■□□□□ 0.39
RTCAO00442 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RTCAO00442 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RTCAO00442 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC17.5■□□□□ 0.39
RTCAO00442 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
RTCAO00442 LGALS8-AS1-201ENST00000487567 1457 ntBASIC17.5■□□□□ 0.39
RTCAO00442 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC17.49■□□□□ 0.39
RTCAO00442 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
RTCAO00442 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
RTCAO00442 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RTCAO00442 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC17.49■□□□□ 0.39
RTCAO00442 HTR7P1-202ENST00000624664 4411 ntBASIC17.49■□□□□ 0.39
RTCAO00442 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC17.49■□□□□ 0.39
RTCAO00442 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RTCAO00442 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RTCAO00442 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC17.49■□□□□ 0.39
RTCAO00442 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
RTCAO00442 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC17.49■□□□□ 0.39
RTCAO00442 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC17.49■□□□□ 0.39
RTCAO00442 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RTCAO00442 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC17.49■□□□□ 0.39
RTCAO00442 AC139887.4-201ENST00000607877 719 ntBASIC17.49■□□□□ 0.39
RTCAO00442 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
RTCAO00442 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RTCAO00442 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RTCAO00442 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RTCAO00442 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC17.49■□□□□ 0.39
RTCAO00442 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC17.49■□□□□ 0.39
RTCAO00442 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC17.49■□□□□ 0.39
RTCAO00442 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
RTCAO00442 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RTCAO00442 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
RTCAO00442 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RTCAO00442 AC093677.2-201ENST00000600169 1863 ntBASIC17.48■□□□□ 0.39
RTCAO00442 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC17.48■□□□□ 0.39
RTCAO00442 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC17.48■□□□□ 0.39
RTCAO00442 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC17.48■□□□□ 0.39
RTCAO00442 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
RTCAO00442 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC17.48■□□□□ 0.39
RTCAO00442 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC17.48■□□□□ 0.39
RTCAO00442 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
RTCAO00442 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC17.48■□□□□ 0.39
RTCAO00442 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC17.48■□□□□ 0.39
RTCAO00442 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
RTCAO00442 PPOX-219ENST00000544598 813 ntTSL 2 BASIC17.48■□□□□ 0.39
RTCAO00442 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC17.48■□□□□ 0.39
RTCAO00442 AL441883.1-201ENST00000566170 1045 ntBASIC17.48■□□□□ 0.39
RTCAO00442 AL157888.1-201ENST00000631930 593 ntBASIC17.48■□□□□ 0.39
RTCAO00442 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RTCAO00442 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
RTCAO00442 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RTCAO00442 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC17.48■□□□□ 0.39
RTCAO00442 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RTCAO00442 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
RTCAO00442 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RTCAO00442 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
RTCAO00442 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
RTCAO00442 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RTCAO00442 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC17.48■□□□□ 0.39
RTCAO00442 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RTCAO00442 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RTCAO00442 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC17.47■□□□□ 0.39
RTCAO00442 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC17.47■□□□□ 0.39
RTCAO00442 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC17.47■□□□□ 0.39
RTCAO00442 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RTCAO00442 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RTCAO00442 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RTCAO00442 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RTCAO00442 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RTCAO00442 ABALON-201ENST00000629058 1903 ntBASIC17.47■□□□□ 0.39
RTCAO00442 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC17.47■□□□□ 0.39
RTCAO00442 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RTCAO00442 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC17.47■□□□□ 0.39
RTCAO00442 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RTCAO00442 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
RTCAO00442 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC17.47■□□□□ 0.39
RTCAO00442 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RTCAO00442 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RTCAO00442 AP000523.1-201ENST00000398242 1049 ntBASIC17.47■□□□□ 0.39
RTCAO00442 COX11P1-201ENST00000489116 835 ntBASIC17.47■□□□□ 0.39
RTCAO00442 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC17.47■□□□□ 0.39
RTCAO00442 MIR3917-201ENST00000580971 93 ntBASIC17.47■□□□□ 0.39
RTCAO00442 AC140113.3-201ENST00000605663 199 ntBASIC17.47■□□□□ 0.39
RTCAO00442 AC011558.1-201ENST00000623459 338 ntBASIC17.47■□□□□ 0.39
RTCAO00442 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RTCAO00442 GMCL1P1-201ENST00000463439 1581 ntBASIC17.47■□□□□ 0.39
RTCAO00442 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RTCAO00442 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RTCAO00442 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC17.47■□□□□ 0.39
RTCAO00442 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
RTCAO00442 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RTCAO00442 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC17.47■□□□□ 0.39
RTCAO00442 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms