Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SLC28A1O00337 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
SLC28A1O00337 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
SLC28A1O00337 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SLC28A1O00337 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SLC28A1O00337 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC17.66■□□□□ 0.42
SLC28A1O00337 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SLC28A1O00337 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
SLC28A1O00337 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
SLC28A1O00337 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC17.66■□□□□ 0.42
SLC28A1O00337 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
SLC28A1O00337 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC17.66■□□□□ 0.42
SLC28A1O00337 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SLC28A1O00337 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SLC28A1O00337 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SLC28A1O00337 KRT18P23-201ENST00000435622 1283 ntBASIC17.66■□□□□ 0.42
SLC28A1O00337 AP003071.4-201ENST00000562276 1284 ntBASIC17.66■□□□□ 0.42
SLC28A1O00337 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC17.66■□□□□ 0.42
SLC28A1O00337 AL353719.1-201ENST00000566847 864 ntBASIC17.66■□□□□ 0.42
SLC28A1O00337 NAT14-202ENST00000587400 416 ntTSL 5 BASIC17.66■□□□□ 0.42
SLC28A1O00337 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC17.66■□□□□ 0.42
SLC28A1O00337 AL023803.3-201ENST00000615559 522 ntBASIC17.66■□□□□ 0.42
SLC28A1O00337 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SLC28A1O00337 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
SLC28A1O00337 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SLC28A1O00337 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SLC28A1O00337 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
SLC28A1O00337 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
SLC28A1O00337 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SLC28A1O00337 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SLC28A1O00337 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SLC28A1O00337 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC17.65■□□□□ 0.42
SLC28A1O00337 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SLC28A1O00337 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SLC28A1O00337 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SLC28A1O00337 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SLC28A1O00337 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
SLC28A1O00337 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SLC28A1O00337 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
SLC28A1O00337 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
SLC28A1O00337 UNC93B2-201ENST00000285383 730 ntBASIC17.65■□□□□ 0.42
SLC28A1O00337 MDFI-202ENST00000373050 809 ntTSL 2 BASIC17.65■□□□□ 0.42
SLC28A1O00337 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SLC28A1O00337 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC17.65■□□□□ 0.42
SLC28A1O00337 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC17.65■□□□□ 0.42
SLC28A1O00337 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC17.65■□□□□ 0.42
SLC28A1O00337 AP003041.3-201ENST00000527151 707 ntBASIC17.65■□□□□ 0.42
SLC28A1O00337 AC009065.1-201ENST00000564055 1225 ntBASIC17.65■□□□□ 0.42
SLC28A1O00337 MNT-208ENST00000575394 606 ntTSL 4 BASIC17.65■□□□□ 0.42
SLC28A1O00337 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SLC28A1O00337 FGFR1-206ENST00000397091 5702 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SLC28A1O00337 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SLC28A1O00337 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
SLC28A1O00337 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
SLC28A1O00337 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SLC28A1O00337 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC17.65■□□□□ 0.42
SLC28A1O00337 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SLC28A1O00337 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
SLC28A1O00337 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SLC28A1O00337 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SLC28A1O00337 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
SLC28A1O00337 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC17.65■□□□□ 0.42
SLC28A1O00337 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC17.65■□□□□ 0.42
SLC28A1O00337 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
SLC28A1O00337 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC17.64■□□□□ 0.42
SLC28A1O00337 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
SLC28A1O00337 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
SLC28A1O00337 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
SLC28A1O00337 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
SLC28A1O00337 AC134043.2-201ENST00000624206 2238 ntBASIC17.64■□□□□ 0.42
SLC28A1O00337 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.42
SLC28A1O00337 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SLC28A1O00337 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC17.64■□□□□ 0.41
SLC28A1O00337 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC17.64■□□□□ 0.41
SLC28A1O00337 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC17.64■□□□□ 0.41
SLC28A1O00337 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SLC28A1O00337 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SLC28A1O00337 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SLC28A1O00337 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
SLC28A1O00337 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC17.64■□□□□ 0.41
SLC28A1O00337 WWOX-216ENST00000569818 525 ntBASIC17.64■□□□□ 0.41
SLC28A1O00337 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
SLC28A1O00337 Z99916.2-201ENST00000604037 246 ntBASIC17.64■□□□□ 0.41
SLC28A1O00337 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SLC28A1O00337 UROS-202ENST00000368778 1556 ntTSL 2 BASIC17.64■□□□□ 0.41
SLC28A1O00337 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC17.64■□□□□ 0.41
SLC28A1O00337 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SLC28A1O00337 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SLC28A1O00337 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SLC28A1O00337 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SLC28A1O00337 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
SLC28A1O00337 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC17.64■□□□□ 0.41
SLC28A1O00337 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC17.64■□□□□ 0.41
SLC28A1O00337 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
SLC28A1O00337 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SLC28A1O00337 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SLC28A1O00337 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC17.63■□□□□ 0.41
SLC28A1O00337 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
SLC28A1O00337 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
SLC28A1O00337 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms