Protein–RNA interactions for Protein: O00299

CLIC1, Chloride intracellular channel protein 1, humanhuman

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC1O00299 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC17.31■□□□□ 0.36
CLIC1O00299 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC17.31■□□□□ 0.36
CLIC1O00299 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLIC1O00299 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
CLIC1O00299 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CLIC1O00299 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CLIC1O00299 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CLIC1O00299 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CLIC1O00299 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CLIC1O00299 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CLIC1O00299 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CLIC1O00299 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
CLIC1O00299 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC17.3■□□□□ 0.36
CLIC1O00299 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CLIC1O00299 AC097488.1-201ENST00000507834 756 ntBASIC17.3■□□□□ 0.36
CLIC1O00299 NUDT16P1-203ENST00000513809 620 ntBASIC17.3■□□□□ 0.36
CLIC1O00299 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC17.3■□□□□ 0.36
CLIC1O00299 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC17.3■□□□□ 0.36
CLIC1O00299 MIR3180-5-201ENST00000583743 153 ntBASIC17.3■□□□□ 0.36
CLIC1O00299 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CLIC1O00299 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CLIC1O00299 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
CLIC1O00299 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC17.29■□□□□ 0.36
CLIC1O00299 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CLIC1O00299 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC17.29■□□□□ 0.36
CLIC1O00299 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLIC1O00299 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
CLIC1O00299 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CLIC1O00299 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLIC1O00299 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLIC1O00299 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
CLIC1O00299 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLIC1O00299 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
CLIC1O00299 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLIC1O00299 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLIC1O00299 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLIC1O00299 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC17.29■□□□□ 0.36
CLIC1O00299 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC17.29■□□□□ 0.36
CLIC1O00299 FDX2-206ENST00000492239 773 ntTSL 2 BASIC17.29■□□□□ 0.36
CLIC1O00299 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC17.29■□□□□ 0.36
CLIC1O00299 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
CLIC1O00299 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
CLIC1O00299 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CLIC1O00299 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CLIC1O00299 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC17.29■□□□□ 0.36
CLIC1O00299 WAC-202ENST00000347934 2839 ntTSL 5 BASIC17.29■□□□□ 0.36
CLIC1O00299 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC17.29■□□□□ 0.36
CLIC1O00299 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CLIC1O00299 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC17.28■□□□□ 0.36
CLIC1O00299 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLIC1O00299 SDHAP2-201ENST00000455183 2001 ntBASIC17.28■□□□□ 0.36
CLIC1O00299 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLIC1O00299 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLIC1O00299 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLIC1O00299 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLIC1O00299 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
CLIC1O00299 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLIC1O00299 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
CLIC1O00299 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
CLIC1O00299 AL163051.1-201ENST00000569214 1512 ntBASIC17.28■□□□□ 0.36
CLIC1O00299 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC17.28■□□□□ 0.36
CLIC1O00299 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLIC1O00299 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLIC1O00299 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC17.28■□□□□ 0.36
CLIC1O00299 GRAP-204ENST00000573099 846 ntTSL 3 BASIC17.28■□□□□ 0.36
CLIC1O00299 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC17.28■□□□□ 0.36
CLIC1O00299 CYGB-204ENST00000589342 815 ntTSL 3 BASIC17.28■□□□□ 0.36
CLIC1O00299 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC17.28■□□□□ 0.36
CLIC1O00299 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC17.28■□□□□ 0.36
CLIC1O00299 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
CLIC1O00299 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLIC1O00299 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC17.28■□□□□ 0.36
CLIC1O00299 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLIC1O00299 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC17.28■□□□□ 0.36
CLIC1O00299 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC17.28■□□□□ 0.36
CLIC1O00299 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
CLIC1O00299 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLIC1O00299 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
CLIC1O00299 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
CLIC1O00299 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CLIC1O00299 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CLIC1O00299 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
CLIC1O00299 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC17.27■□□□□ 0.36
CLIC1O00299 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CLIC1O00299 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
CLIC1O00299 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.36
CLIC1O00299 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CLIC1O00299 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CLIC1O00299 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CLIC1O00299 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
CLIC1O00299 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CLIC1O00299 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CLIC1O00299 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CLIC1O00299 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC17.27■□□□□ 0.36
CLIC1O00299 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
CLIC1O00299 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC17.27■□□□□ 0.36
CLIC1O00299 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
CLIC1O00299 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
CLIC1O00299 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC17.27■□□□□ 0.36
CLIC1O00299 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms