Protein–RNA interactions for Protein: H3BSU7

TMX2-CTNND1, TMX2-CTNND1 readthrough (NMD candidate), humanhuman

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMX2-CTNND1H3BSU7 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC17.98■□□□□ 0.47
TMX2-CTNND1H3BSU7 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC17.98■□□□□ 0.47
TMX2-CTNND1H3BSU7 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TMX2-CTNND1H3BSU7 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TMX2-CTNND1H3BSU7 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TMX2-CTNND1H3BSU7 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TMX2-CTNND1H3BSU7 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TMX2-CTNND1H3BSU7 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC17.98■□□□□ 0.47
TMX2-CTNND1H3BSU7 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TMX2-CTNND1H3BSU7 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
TMX2-CTNND1H3BSU7 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC17.98■□□□□ 0.47
TMX2-CTNND1H3BSU7 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TMX2-CTNND1H3BSU7 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TMX2-CTNND1H3BSU7 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TMX2-CTNND1H3BSU7 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TMX2-CTNND1H3BSU7 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TMX2-CTNND1H3BSU7 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
TMX2-CTNND1H3BSU7 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TMX2-CTNND1H3BSU7 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC17.98■□□□□ 0.47
TMX2-CTNND1H3BSU7 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC17.97■□□□□ 0.47
TMX2-CTNND1H3BSU7 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TMX2-CTNND1H3BSU7 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TMX2-CTNND1H3BSU7 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC17.97■□□□□ 0.47
TMX2-CTNND1H3BSU7 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
TMX2-CTNND1H3BSU7 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TMX2-CTNND1H3BSU7 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
TMX2-CTNND1H3BSU7 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
TMX2-CTNND1H3BSU7 AC016734.2-201ENST00000624325 1377 ntBASIC17.97■□□□□ 0.47
TMX2-CTNND1H3BSU7 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC17.97■□□□□ 0.47
TMX2-CTNND1H3BSU7 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TMX2-CTNND1H3BSU7 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TMX2-CTNND1H3BSU7 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TMX2-CTNND1H3BSU7 HLA-F-220ENST00000434407 884 ntBASIC17.97■□□□□ 0.47
TMX2-CTNND1H3BSU7 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TMX2-CTNND1H3BSU7 SEC1P-202ENST00000473944 940 ntBASIC17.97■□□□□ 0.47
TMX2-CTNND1H3BSU7 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC17.97■□□□□ 0.47
TMX2-CTNND1H3BSU7 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC17.97■□□□□ 0.47
TMX2-CTNND1H3BSU7 MIR3917-201ENST00000580971 93 ntBASIC17.97■□□□□ 0.47
TMX2-CTNND1H3BSU7 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
TMX2-CTNND1H3BSU7 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC17.97■□□□□ 0.47
TMX2-CTNND1H3BSU7 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TMX2-CTNND1H3BSU7 NOC2LP2-201ENST00000407594 1944 ntBASIC17.97■□□□□ 0.47
TMX2-CTNND1H3BSU7 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TMX2-CTNND1H3BSU7 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC17.97■□□□□ 0.47
TMX2-CTNND1H3BSU7 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC17.97■□□□□ 0.47
TMX2-CTNND1H3BSU7 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TMX2-CTNND1H3BSU7 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TMX2-CTNND1H3BSU7 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TMX2-CTNND1H3BSU7 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TMX2-CTNND1H3BSU7 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
TMX2-CTNND1H3BSU7 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TMX2-CTNND1H3BSU7 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TMX2-CTNND1H3BSU7 AC067852.2-201ENST00000590513 2313 ntBASIC17.97■□□□□ 0.47
TMX2-CTNND1H3BSU7 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TMX2-CTNND1H3BSU7 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC17.96■□□□□ 0.47
TMX2-CTNND1H3BSU7 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TMX2-CTNND1H3BSU7 AC004870.1-201ENST00000315132 882 ntBASIC17.96■□□□□ 0.47
TMX2-CTNND1H3BSU7 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TMX2-CTNND1H3BSU7 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TMX2-CTNND1H3BSU7 CHCHD2P8-201ENST00000429873 447 ntBASIC17.96■□□□□ 0.47
TMX2-CTNND1H3BSU7 NUS1P1-201ENST00000446295 882 ntBASIC17.96■□□□□ 0.47
TMX2-CTNND1H3BSU7 FAAHP1-202ENST00000446499 1238 ntBASIC17.96■□□□□ 0.47
TMX2-CTNND1H3BSU7 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC17.96■□□□□ 0.47
TMX2-CTNND1H3BSU7 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC17.96■□□□□ 0.47
TMX2-CTNND1H3BSU7 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TMX2-CTNND1H3BSU7 IRF5-214ENST00000613821 595 ntTSL 5 BASIC17.96■□□□□ 0.47
TMX2-CTNND1H3BSU7 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC17.96■□□□□ 0.47
TMX2-CTNND1H3BSU7 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TMX2-CTNND1H3BSU7 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TMX2-CTNND1H3BSU7 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
TMX2-CTNND1H3BSU7 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC17.96■□□□□ 0.47
TMX2-CTNND1H3BSU7 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
TMX2-CTNND1H3BSU7 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TMX2-CTNND1H3BSU7 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TMX2-CTNND1H3BSU7 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC17.96■□□□□ 0.47
TMX2-CTNND1H3BSU7 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC17.96■□□□□ 0.47
TMX2-CTNND1H3BSU7 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
TMX2-CTNND1H3BSU7 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
TMX2-CTNND1H3BSU7 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
TMX2-CTNND1H3BSU7 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
TMX2-CTNND1H3BSU7 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
TMX2-CTNND1H3BSU7 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
TMX2-CTNND1H3BSU7 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
TMX2-CTNND1H3BSU7 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC17.96■□□□□ 0.47
TMX2-CTNND1H3BSU7 SDHAP1-207ENST00000440850 2000 ntBASIC17.96■□□□□ 0.47
TMX2-CTNND1H3BSU7 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
TMX2-CTNND1H3BSU7 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC17.96■□□□□ 0.47
TMX2-CTNND1H3BSU7 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC17.96■□□□□ 0.47
TMX2-CTNND1H3BSU7 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
TMX2-CTNND1H3BSU7 AL162741.1-201ENST00000565563 1558 ntBASIC17.96■□□□□ 0.46
TMX2-CTNND1H3BSU7 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC17.96■□□□□ 0.46
TMX2-CTNND1H3BSU7 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
TMX2-CTNND1H3BSU7 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
TMX2-CTNND1H3BSU7 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TMX2-CTNND1H3BSU7 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
TMX2-CTNND1H3BSU7 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
TMX2-CTNND1H3BSU7 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TMX2-CTNND1H3BSU7 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC17.95■□□□□ 0.46
TMX2-CTNND1H3BSU7 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TMX2-CTNND1H3BSU7 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms