Protein–RNA interactions for Protein: H3BMG3

SMKR1, Small lysine-rich protein 1, humanhuman

Predictions only

Length 65 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMKR1H3BMG3 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC13.42□□□□□ -0.26
SMKR1H3BMG3 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
SMKR1H3BMG3 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
SMKR1H3BMG3 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SMKR1H3BMG3 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
SMKR1H3BMG3 AC018695.7-201ENST00000624587 2492 ntBASIC13.41□□□□□ -0.26
SMKR1H3BMG3 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SMKR1H3BMG3 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
SMKR1H3BMG3 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
SMKR1H3BMG3 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SMKR1H3BMG3 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
SMKR1H3BMG3 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SMKR1H3BMG3 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SMKR1H3BMG3 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SMKR1H3BMG3 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC13.41□□□□□ -0.26
SMKR1H3BMG3 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
SMKR1H3BMG3 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
SMKR1H3BMG3 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
SMKR1H3BMG3 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SMKR1H3BMG3 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
SMKR1H3BMG3 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC13.41□□□□□ -0.26
SMKR1H3BMG3 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
SMKR1H3BMG3 BX276092.2-201ENST00000417668 665 ntBASIC13.41□□□□□ -0.26
SMKR1H3BMG3 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
SMKR1H3BMG3 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC13.41□□□□□ -0.26
SMKR1H3BMG3 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC13.41□□□□□ -0.26
SMKR1H3BMG3 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
SMKR1H3BMG3 AL160286.2-201ENST00000567150 934 ntBASIC13.41□□□□□ -0.26
SMKR1H3BMG3 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC13.41□□□□□ -0.26
SMKR1H3BMG3 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC13.41□□□□□ -0.26
SMKR1H3BMG3 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC13.41□□□□□ -0.26
SMKR1H3BMG3 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC13.41□□□□□ -0.26
SMKR1H3BMG3 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC13.41□□□□□ -0.26
SMKR1H3BMG3 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC13.41□□□□□ -0.26
SMKR1H3BMG3 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SMKR1H3BMG3 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
SMKR1H3BMG3 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SMKR1H3BMG3 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
SMKR1H3BMG3 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
SMKR1H3BMG3 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SMKR1H3BMG3 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SMKR1H3BMG3 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC13.41□□□□□ -0.26
SMKR1H3BMG3 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC13.41□□□□□ -0.26
SMKR1H3BMG3 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
SMKR1H3BMG3 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
SMKR1H3BMG3 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
SMKR1H3BMG3 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
SMKR1H3BMG3 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
SMKR1H3BMG3 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC13.41□□□□□ -0.26
SMKR1H3BMG3 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
SMKR1H3BMG3 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SMKR1H3BMG3 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SMKR1H3BMG3 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
SMKR1H3BMG3 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
SMKR1H3BMG3 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
SMKR1H3BMG3 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
SMKR1H3BMG3 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SMKR1H3BMG3 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SMKR1H3BMG3 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
SMKR1H3BMG3 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC13.4□□□□□ -0.26
SMKR1H3BMG3 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC13.4□□□□□ -0.26
SMKR1H3BMG3 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
SMKR1H3BMG3 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
SMKR1H3BMG3 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SMKR1H3BMG3 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SMKR1H3BMG3 MIR638-201ENST00000385237 100 ntBASIC13.4□□□□□ -0.26
SMKR1H3BMG3 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
SMKR1H3BMG3 NME6-213ENST00000451657 871 ntTSL 2 BASIC13.4□□□□□ -0.26
SMKR1H3BMG3 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
SMKR1H3BMG3 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC13.4□□□□□ -0.26
SMKR1H3BMG3 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
SMKR1H3BMG3 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
SMKR1H3BMG3 AL139384.1-201ENST00000612143 3047 ntBASIC13.4□□□□□ -0.26
SMKR1H3BMG3 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SMKR1H3BMG3 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC13.4□□□□□ -0.26
SMKR1H3BMG3 NME9-203ENST00000383180 2133 ntTSL 2 BASIC13.4□□□□□ -0.26
SMKR1H3BMG3 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SMKR1H3BMG3 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
SMKR1H3BMG3 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC13.4□□□□□ -0.26
SMKR1H3BMG3 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SMKR1H3BMG3 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
SMKR1H3BMG3 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC13.4□□□□□ -0.26
SMKR1H3BMG3 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SMKR1H3BMG3 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SMKR1H3BMG3 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SMKR1H3BMG3 NARF-204ENST00000390006 1766 ntTSL 2 BASIC13.4□□□□□ -0.26
SMKR1H3BMG3 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
SMKR1H3BMG3 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
SMKR1H3BMG3 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
SMKR1H3BMG3 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC13.4□□□□□ -0.27
SMKR1H3BMG3 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.27
SMKR1H3BMG3 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.27
SMKR1H3BMG3 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
SMKR1H3BMG3 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
SMKR1H3BMG3 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
SMKR1H3BMG3 KRT8P45-201ENST00000414328 1447 ntBASIC13.39□□□□□ -0.27
SMKR1H3BMG3 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC13.39□□□□□ -0.27
SMKR1H3BMG3 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
SMKR1H3BMG3 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
SMKR1H3BMG3 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC13.39□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms