Protein–RNA interactions for Protein: A6NDI0

TRIM49B, Putative tripartite motif-containing protein 49B, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49BA6NDI0 SP100-208ENST00000427101 1922 ntTSL 2 BASIC20.21■□□□□ 0.83
TRIM49BA6NDI0 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
TRIM49BA6NDI0 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRIM49BA6NDI0 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
TRIM49BA6NDI0 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
TRIM49BA6NDI0 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
TRIM49BA6NDI0 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TRIM49BA6NDI0 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC20.2■□□□□ 0.82
TRIM49BA6NDI0 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
TRIM49BA6NDI0 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TRIM49BA6NDI0 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC20.2■□□□□ 0.82
TRIM49BA6NDI0 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
TRIM49BA6NDI0 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TRIM49BA6NDI0 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
TRIM49BA6NDI0 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TRIM49BA6NDI0 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TRIM49BA6NDI0 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC20.2■□□□□ 0.82
TRIM49BA6NDI0 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC20.2■□□□□ 0.82
TRIM49BA6NDI0 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC20.2■□□□□ 0.82
TRIM49BA6NDI0 STK4-201ENST00000372801 2038 ntTSL 2 BASIC20.2■□□□□ 0.82
TRIM49BA6NDI0 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TRIM49BA6NDI0 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TRIM49BA6NDI0 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
TRIM49BA6NDI0 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TRIM49BA6NDI0 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC20.2■□□□□ 0.82
TRIM49BA6NDI0 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC20.2■□□□□ 0.82
TRIM49BA6NDI0 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
TRIM49BA6NDI0 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TRIM49BA6NDI0 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRIM49BA6NDI0 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
TRIM49BA6NDI0 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRIM49BA6NDI0 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRIM49BA6NDI0 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRIM49BA6NDI0 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC20.19■□□□□ 0.82
TRIM49BA6NDI0 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRIM49BA6NDI0 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRIM49BA6NDI0 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRIM49BA6NDI0 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRIM49BA6NDI0 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRIM49BA6NDI0 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC20.19■□□□□ 0.82
TRIM49BA6NDI0 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC20.19■□□□□ 0.82
TRIM49BA6NDI0 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRIM49BA6NDI0 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC20.19■□□□□ 0.82
TRIM49BA6NDI0 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
TRIM49BA6NDI0 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
TRIM49BA6NDI0 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
TRIM49BA6NDI0 AC010653.2-201ENST00000623505 997 ntBASIC20.19■□□□□ 0.82
TRIM49BA6NDI0 AC112497.1-201ENST00000624824 639 ntBASIC20.19■□□□□ 0.82
TRIM49BA6NDI0 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRIM49BA6NDI0 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRIM49BA6NDI0 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
TRIM49BA6NDI0 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC20.19■□□□□ 0.82
TRIM49BA6NDI0 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRIM49BA6NDI0 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRIM49BA6NDI0 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC20.19■□□□□ 0.82
TRIM49BA6NDI0 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
TRIM49BA6NDI0 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
TRIM49BA6NDI0 KRT8P7-201ENST00000533003 1432 ntBASIC20.19■□□□□ 0.82
TRIM49BA6NDI0 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRIM49BA6NDI0 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
TRIM49BA6NDI0 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRIM49BA6NDI0 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRIM49BA6NDI0 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRIM49BA6NDI0 PHB2-202ENST00000440277 996 ntTSL 5 BASIC20.18■□□□□ 0.82
TRIM49BA6NDI0 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRIM49BA6NDI0 GXYLT1P6-201ENST00000456472 1187 ntBASIC20.18■□□□□ 0.82
TRIM49BA6NDI0 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC20.18■□□□□ 0.82
TRIM49BA6NDI0 EGLN1P1-201ENST00000531623 762 ntBASIC20.18■□□□□ 0.82
TRIM49BA6NDI0 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
TRIM49BA6NDI0 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC20.18■□□□□ 0.82
TRIM49BA6NDI0 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRIM49BA6NDI0 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
TRIM49BA6NDI0 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
TRIM49BA6NDI0 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRIM49BA6NDI0 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRIM49BA6NDI0 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC20.18■□□□□ 0.82
TRIM49BA6NDI0 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC20.18■□□□□ 0.82
TRIM49BA6NDI0 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
TRIM49BA6NDI0 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRIM49BA6NDI0 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
TRIM49BA6NDI0 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC20.18■□□□□ 0.82
TRIM49BA6NDI0 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC20.18■□□□□ 0.82
TRIM49BA6NDI0 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRIM49BA6NDI0 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
TRIM49BA6NDI0 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRIM49BA6NDI0 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRIM49BA6NDI0 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRIM49BA6NDI0 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRIM49BA6NDI0 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
TRIM49BA6NDI0 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
TRIM49BA6NDI0 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
TRIM49BA6NDI0 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
TRIM49BA6NDI0 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
TRIM49BA6NDI0 AL596275.1-201ENST00000423464 877 ntBASIC20.17■□□□□ 0.82
TRIM49BA6NDI0 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC20.17■□□□□ 0.82
TRIM49BA6NDI0 AC104390.1-201ENST00000555663 520 ntBASIC20.17■□□□□ 0.82
TRIM49BA6NDI0 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC20.17■□□□□ 0.82
TRIM49BA6NDI0 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC20.17■□□□□ 0.82
TRIM49BA6NDI0 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
TRIM49BA6NDI0 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms