Protein–RNA interactions for Protein: A0A576

TCRBV9S1A1T, T-cell receptor beta variable 3-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV9S1A1TA0A576 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TCRBV9S1A1TA0A576 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
TCRBV9S1A1TA0A576 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC18.46■□□□□ 0.55
TCRBV9S1A1TA0A576 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
TCRBV9S1A1TA0A576 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC18.46■□□□□ 0.55
TCRBV9S1A1TA0A576 MIR149-201ENST00000384879 89 ntBASIC18.46■□□□□ 0.55
TCRBV9S1A1TA0A576 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
TCRBV9S1A1TA0A576 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC18.46■□□□□ 0.55
TCRBV9S1A1TA0A576 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TCRBV9S1A1TA0A576 AC097488.1-201ENST00000507834 756 ntBASIC18.46■□□□□ 0.55
TCRBV9S1A1TA0A576 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC18.46■□□□□ 0.55
TCRBV9S1A1TA0A576 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
TCRBV9S1A1TA0A576 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
TCRBV9S1A1TA0A576 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC18.46■□□□□ 0.55
TCRBV9S1A1TA0A576 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
TCRBV9S1A1TA0A576 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
TCRBV9S1A1TA0A576 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
TCRBV9S1A1TA0A576 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
TCRBV9S1A1TA0A576 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
TCRBV9S1A1TA0A576 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
TCRBV9S1A1TA0A576 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
TCRBV9S1A1TA0A576 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
TCRBV9S1A1TA0A576 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
TCRBV9S1A1TA0A576 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC18.45■□□□□ 0.54
TCRBV9S1A1TA0A576 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
TCRBV9S1A1TA0A576 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TCRBV9S1A1TA0A576 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
TCRBV9S1A1TA0A576 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC18.45■□□□□ 0.54
TCRBV9S1A1TA0A576 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC18.45■□□□□ 0.54
TCRBV9S1A1TA0A576 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC18.45■□□□□ 0.54
TCRBV9S1A1TA0A576 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC18.45■□□□□ 0.54
TCRBV9S1A1TA0A576 NAT14-202ENST00000587400 416 ntTSL 5 BASIC18.45■□□□□ 0.54
TCRBV9S1A1TA0A576 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC18.45■□□□□ 0.54
TCRBV9S1A1TA0A576 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC18.45■□□□□ 0.54
TCRBV9S1A1TA0A576 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TCRBV9S1A1TA0A576 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
TCRBV9S1A1TA0A576 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
TCRBV9S1A1TA0A576 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TCRBV9S1A1TA0A576 CEP83-AS1-201ENST00000623122 2482 ntBASIC18.45■□□□□ 0.54
TCRBV9S1A1TA0A576 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
TCRBV9S1A1TA0A576 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
TCRBV9S1A1TA0A576 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
TCRBV9S1A1TA0A576 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
TCRBV9S1A1TA0A576 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC18.45■□□□□ 0.54
TCRBV9S1A1TA0A576 AC139713.2-201ENST00000641328 2723 ntBASIC18.44■□□□□ 0.54
TCRBV9S1A1TA0A576 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TCRBV9S1A1TA0A576 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
TCRBV9S1A1TA0A576 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TCRBV9S1A1TA0A576 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC18.44■□□□□ 0.54
TCRBV9S1A1TA0A576 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
TCRBV9S1A1TA0A576 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TCRBV9S1A1TA0A576 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
TCRBV9S1A1TA0A576 AC090340.1-201ENST00000620778 4980 ntBASIC18.44■□□□□ 0.54
TCRBV9S1A1TA0A576 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
TCRBV9S1A1TA0A576 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TCRBV9S1A1TA0A576 AC006116.8-202ENST00000587620 1550 ntBASIC18.44■□□□□ 0.54
TCRBV9S1A1TA0A576 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TCRBV9S1A1TA0A576 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
TCRBV9S1A1TA0A576 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
TCRBV9S1A1TA0A576 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC18.44■□□□□ 0.54
TCRBV9S1A1TA0A576 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC18.44■□□□□ 0.54
TCRBV9S1A1TA0A576 MNT-208ENST00000575394 606 ntTSL 4 BASIC18.44■□□□□ 0.54
TCRBV9S1A1TA0A576 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC18.44■□□□□ 0.54
TCRBV9S1A1TA0A576 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TCRBV9S1A1TA0A576 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC18.44■□□□□ 0.54
TCRBV9S1A1TA0A576 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
TCRBV9S1A1TA0A576 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
TCRBV9S1A1TA0A576 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
TCRBV9S1A1TA0A576 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC18.44■□□□□ 0.54
TCRBV9S1A1TA0A576 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
TCRBV9S1A1TA0A576 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TCRBV9S1A1TA0A576 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC18.44■□□□□ 0.54
TCRBV9S1A1TA0A576 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TCRBV9S1A1TA0A576 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
TCRBV9S1A1TA0A576 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
TCRBV9S1A1TA0A576 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TCRBV9S1A1TA0A576 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
TCRBV9S1A1TA0A576 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
TCRBV9S1A1TA0A576 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
TCRBV9S1A1TA0A576 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
TCRBV9S1A1TA0A576 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
TCRBV9S1A1TA0A576 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TCRBV9S1A1TA0A576 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC18.43■□□□□ 0.54
TCRBV9S1A1TA0A576 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC18.43■□□□□ 0.54
TCRBV9S1A1TA0A576 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TCRBV9S1A1TA0A576 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC18.43■□□□□ 0.54
TCRBV9S1A1TA0A576 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC18.43■□□□□ 0.54
TCRBV9S1A1TA0A576 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
TCRBV9S1A1TA0A576 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC18.43■□□□□ 0.54
TCRBV9S1A1TA0A576 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TCRBV9S1A1TA0A576 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
TCRBV9S1A1TA0A576 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TCRBV9S1A1TA0A576 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
TCRBV9S1A1TA0A576 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
TCRBV9S1A1TA0A576 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC18.43■□□□□ 0.54
TCRBV9S1A1TA0A576 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC18.43■□□□□ 0.54
TCRBV9S1A1TA0A576 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC18.43■□□□□ 0.54
TCRBV9S1A1TA0A576 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC18.43■□□□□ 0.54
TCRBV9S1A1TA0A576 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
TCRBV9S1A1TA0A576 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms