Protein–RNA interactions for Protein: A0A0D9SF12

CCDC163, Coiled-coil domain-containing 163, humanhuman

Predictions only

Length 145 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163A0A0D9SF12 AC004967.1-201ENST00000453589 447 ntBASIC18.08■□□□□ 0.48
CCDC163A0A0D9SF12 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CCDC163A0A0D9SF12 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
CCDC163A0A0D9SF12 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC18.08■□□□□ 0.48
CCDC163A0A0D9SF12 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC18.08■□□□□ 0.48
CCDC163A0A0D9SF12 AC012640.2-201ENST00000561606 901 ntBASIC18.08■□□□□ 0.48
CCDC163A0A0D9SF12 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC18.08■□□□□ 0.48
CCDC163A0A0D9SF12 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC18.08■□□□□ 0.48
CCDC163A0A0D9SF12 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CCDC163A0A0D9SF12 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
CCDC163A0A0D9SF12 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC18.08■□□□□ 0.48
CCDC163A0A0D9SF12 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC18.08■□□□□ 0.48
CCDC163A0A0D9SF12 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
CCDC163A0A0D9SF12 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
CCDC163A0A0D9SF12 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CCDC163A0A0D9SF12 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CCDC163A0A0D9SF12 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC18.08■□□□□ 0.48
CCDC163A0A0D9SF12 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CCDC163A0A0D9SF12 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CCDC163A0A0D9SF12 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CCDC163A0A0D9SF12 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CCDC163A0A0D9SF12 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC18.07■□□□□ 0.48
CCDC163A0A0D9SF12 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CCDC163A0A0D9SF12 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CCDC163A0A0D9SF12 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CCDC163A0A0D9SF12 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC18.07■□□□□ 0.48
CCDC163A0A0D9SF12 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CCDC163A0A0D9SF12 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CCDC163A0A0D9SF12 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CCDC163A0A0D9SF12 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CCDC163A0A0D9SF12 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CCDC163A0A0D9SF12 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CCDC163A0A0D9SF12 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC18.07■□□□□ 0.48
CCDC163A0A0D9SF12 FIS1-203ENST00000442303 631 ntTSL 3 BASIC18.07■□□□□ 0.48
CCDC163A0A0D9SF12 AC112482.1-201ENST00000492080 688 ntBASIC18.07■□□□□ 0.48
CCDC163A0A0D9SF12 RNA5SP416-201ENST00000516838 111 ntBASIC18.07■□□□□ 0.48
CCDC163A0A0D9SF12 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC18.07■□□□□ 0.48
CCDC163A0A0D9SF12 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC18.07■□□□□ 0.48
CCDC163A0A0D9SF12 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC18.07■□□□□ 0.48
CCDC163A0A0D9SF12 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC18.07■□□□□ 0.48
CCDC163A0A0D9SF12 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC18.07■□□□□ 0.48
CCDC163A0A0D9SF12 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC18.07■□□□□ 0.48
CCDC163A0A0D9SF12 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC18.07■□□□□ 0.48
CCDC163A0A0D9SF12 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
CCDC163A0A0D9SF12 UROS-202ENST00000368778 1556 ntTSL 2 BASIC18.07■□□□□ 0.48
CCDC163A0A0D9SF12 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
CCDC163A0A0D9SF12 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC18.07■□□□□ 0.48
CCDC163A0A0D9SF12 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC18.07■□□□□ 0.48
CCDC163A0A0D9SF12 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC18.07■□□□□ 0.48
CCDC163A0A0D9SF12 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC18.07■□□□□ 0.48
CCDC163A0A0D9SF12 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC18.07■□□□□ 0.48
CCDC163A0A0D9SF12 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC18.07■□□□□ 0.48
CCDC163A0A0D9SF12 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
CCDC163A0A0D9SF12 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
CCDC163A0A0D9SF12 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
CCDC163A0A0D9SF12 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC163A0A0D9SF12 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC163A0A0D9SF12 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC163A0A0D9SF12 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC163A0A0D9SF12 AL024508.2-201ENST00000607749 1894 ntBASIC18.06■□□□□ 0.48
CCDC163A0A0D9SF12 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC163A0A0D9SF12 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
CCDC163A0A0D9SF12 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC163A0A0D9SF12 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
CCDC163A0A0D9SF12 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC18.06■□□□□ 0.48
CCDC163A0A0D9SF12 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC163A0A0D9SF12 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
CCDC163A0A0D9SF12 KRT18P65-201ENST00000439811 1286 ntBASIC18.06■□□□□ 0.48
CCDC163A0A0D9SF12 DHDH-204ENST00000523250 634 ntTSL 5 BASIC18.06■□□□□ 0.48
CCDC163A0A0D9SF12 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
CCDC163A0A0D9SF12 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
CCDC163A0A0D9SF12 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC18.06■□□□□ 0.48
CCDC163A0A0D9SF12 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC163A0A0D9SF12 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC163A0A0D9SF12 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC18.06■□□□□ 0.48
CCDC163A0A0D9SF12 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC163A0A0D9SF12 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC163A0A0D9SF12 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC163A0A0D9SF12 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
CCDC163A0A0D9SF12 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
CCDC163A0A0D9SF12 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC163A0A0D9SF12 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
CCDC163A0A0D9SF12 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC163A0A0D9SF12 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC163A0A0D9SF12 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC163A0A0D9SF12 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC163A0A0D9SF12 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC18.05■□□□□ 0.48
CCDC163A0A0D9SF12 COA5-202ENST00000409997 557 ntTSL 4 BASIC18.05■□□□□ 0.48
CCDC163A0A0D9SF12 LAGE3P1-201ENST00000425356 484 ntBASIC18.05■□□□□ 0.48
CCDC163A0A0D9SF12 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC18.05■□□□□ 0.48
CCDC163A0A0D9SF12 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC18.05■□□□□ 0.48
CCDC163A0A0D9SF12 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC18.05■□□□□ 0.48
CCDC163A0A0D9SF12 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC18.05■□□□□ 0.48
CCDC163A0A0D9SF12 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC18.05■□□□□ 0.48
CCDC163A0A0D9SF12 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC18.05■□□□□ 0.48
CCDC163A0A0D9SF12 MSRA-206ENST00000521209 814 ntTSL 3 BASIC18.05■□□□□ 0.48
CCDC163A0A0D9SF12 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CCDC163A0A0D9SF12 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC18.05■□□□□ 0.48
CCDC163A0A0D9SF12 AC002347.1-201ENST00000569543 541 ntBASIC18.05■□□□□ 0.48
CCDC163A0A0D9SF12 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC18.05■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 35.6 ms