Protein–RNA interactions for Protein: A0A0A0MS04

TRBV6-7, T-cell receptor beta variable 6-7 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-7A0A0A0MS04 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC15.35■□□□□ 0.05
TRBV6-7A0A0A0MS04 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRBV6-7A0A0A0MS04 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC15.35■□□□□ 0.05
TRBV6-7A0A0A0MS04 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
TRBV6-7A0A0A0MS04 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
TRBV6-7A0A0A0MS04 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
TRBV6-7A0A0A0MS04 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC15.35■□□□□ 0.05
TRBV6-7A0A0A0MS04 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
TRBV6-7A0A0A0MS04 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC15.35■□□□□ 0.05
TRBV6-7A0A0A0MS04 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
TRBV6-7A0A0A0MS04 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
TRBV6-7A0A0A0MS04 SNCG-201ENST00000348795 684 ntTSL 2 BASIC15.35■□□□□ 0.05
TRBV6-7A0A0A0MS04 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC15.35■□□□□ 0.05
TRBV6-7A0A0A0MS04 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC15.35■□□□□ 0.05
TRBV6-7A0A0A0MS04 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC15.35■□□□□ 0.05
TRBV6-7A0A0A0MS04 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
TRBV6-7A0A0A0MS04 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC15.35■□□□□ 0.05
TRBV6-7A0A0A0MS04 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
TRBV6-7A0A0A0MS04 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
TRBV6-7A0A0A0MS04 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRBV6-7A0A0A0MS04 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRBV6-7A0A0A0MS04 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRBV6-7A0A0A0MS04 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC15.35■□□□□ 0.05
TRBV6-7A0A0A0MS04 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC15.35■□□□□ 0.05
TRBV6-7A0A0A0MS04 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
TRBV6-7A0A0A0MS04 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TRBV6-7A0A0A0MS04 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRBV6-7A0A0A0MS04 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC15.34■□□□□ 0.05
TRBV6-7A0A0A0MS04 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC15.34■□□□□ 0.05
TRBV6-7A0A0A0MS04 FSCN1P1-201ENST00000568912 1481 ntBASIC15.34■□□□□ 0.05
TRBV6-7A0A0A0MS04 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRBV6-7A0A0A0MS04 NARF-204ENST00000390006 1766 ntTSL 2 BASIC15.34■□□□□ 0.05
TRBV6-7A0A0A0MS04 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TRBV6-7A0A0A0MS04 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRBV6-7A0A0A0MS04 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRBV6-7A0A0A0MS04 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRBV6-7A0A0A0MS04 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRBV6-7A0A0A0MS04 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRBV6-7A0A0A0MS04 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC15.34■□□□□ 0.05
TRBV6-7A0A0A0MS04 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRBV6-7A0A0A0MS04 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC15.34■□□□□ 0.05
TRBV6-7A0A0A0MS04 MIR564-202ENST00000385049 94 ntBASIC15.34■□□□□ 0.05
TRBV6-7A0A0A0MS04 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC15.34■□□□□ 0.05
TRBV6-7A0A0A0MS04 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC15.34■□□□□ 0.05
TRBV6-7A0A0A0MS04 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRBV6-7A0A0A0MS04 RPPH1-201ENST00000516869 333 ntBASIC15.34■□□□□ 0.05
TRBV6-7A0A0A0MS04 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC15.34■□□□□ 0.05
TRBV6-7A0A0A0MS04 AP000692.2-201ENST00000608391 879 ntBASIC15.34■□□□□ 0.05
TRBV6-7A0A0A0MS04 AC008622.2-201ENST00000617006 1229 ntBASIC15.34■□□□□ 0.05
TRBV6-7A0A0A0MS04 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC15.34■□□□□ 0.05
TRBV6-7A0A0A0MS04 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
TRBV6-7A0A0A0MS04 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC15.34■□□□□ 0.05
TRBV6-7A0A0A0MS04 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRBV6-7A0A0A0MS04 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRBV6-7A0A0A0MS04 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TRBV6-7A0A0A0MS04 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
TRBV6-7A0A0A0MS04 AC090340.1-201ENST00000620778 4980 ntBASIC15.34■□□□□ 0.05
TRBV6-7A0A0A0MS04 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC15.34■□□□□ 0.05
TRBV6-7A0A0A0MS04 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC15.34■□□□□ 0.05
TRBV6-7A0A0A0MS04 AC138932.1-201ENST00000534164 6830 ntBASIC15.34■□□□□ 0.05
TRBV6-7A0A0A0MS04 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRBV6-7A0A0A0MS04 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRBV6-7A0A0A0MS04 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRBV6-7A0A0A0MS04 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
TRBV6-7A0A0A0MS04 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRBV6-7A0A0A0MS04 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC15.34■□□□□ 0.05
TRBV6-7A0A0A0MS04 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
TRBV6-7A0A0A0MS04 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
TRBV6-7A0A0A0MS04 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC15.33■□□□□ 0.05
TRBV6-7A0A0A0MS04 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
TRBV6-7A0A0A0MS04 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
TRBV6-7A0A0A0MS04 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
TRBV6-7A0A0A0MS04 HTR7P1-202ENST00000624664 4411 ntBASIC15.33■□□□□ 0.04
TRBV6-7A0A0A0MS04 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRBV6-7A0A0A0MS04 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRBV6-7A0A0A0MS04 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRBV6-7A0A0A0MS04 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC15.33■□□□□ 0.04
TRBV6-7A0A0A0MS04 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRBV6-7A0A0A0MS04 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRBV6-7A0A0A0MS04 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TRBV6-7A0A0A0MS04 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC15.33■□□□□ 0.04
TRBV6-7A0A0A0MS04 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRBV6-7A0A0A0MS04 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TRBV6-7A0A0A0MS04 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC15.33■□□□□ 0.04
TRBV6-7A0A0A0MS04 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC15.33■□□□□ 0.04
TRBV6-7A0A0A0MS04 TK2-204ENST00000525974 1178 ntTSL 2 BASIC15.33■□□□□ 0.04
TRBV6-7A0A0A0MS04 RNF121-214ENST00000533380 870 ntTSL 3 BASIC15.33■□□□□ 0.04
TRBV6-7A0A0A0MS04 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC15.33■□□□□ 0.04
TRBV6-7A0A0A0MS04 RPS15-203ENST00000586096 570 ntTSL 2 BASIC15.33■□□□□ 0.04
TRBV6-7A0A0A0MS04 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC15.33■□□□□ 0.04
TRBV6-7A0A0A0MS04 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TRBV6-7A0A0A0MS04 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRBV6-7A0A0A0MS04 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC15.33■□□□□ 0.04
TRBV6-7A0A0A0MS04 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC15.33■□□□□ 0.04
TRBV6-7A0A0A0MS04 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRBV6-7A0A0A0MS04 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRBV6-7A0A0A0MS04 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
TRBV6-7A0A0A0MS04 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRBV6-7A0A0A0MS04 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRBV6-7A0A0A0MS04 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms