Protein–RNA interactions for Protein: A0A075B6X5

TRAV18, T-cell receptor alpha variable 18 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV18A0A075B6X5 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRAV18A0A075B6X5 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRAV18A0A075B6X5 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRAV18A0A075B6X5 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRAV18A0A075B6X5 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC15.78■□□□□ 0.12
TRAV18A0A075B6X5 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC15.78■□□□□ 0.12
TRAV18A0A075B6X5 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
TRAV18A0A075B6X5 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRAV18A0A075B6X5 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRAV18A0A075B6X5 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRAV18A0A075B6X5 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TRAV18A0A075B6X5 PPP1R14BP2-201ENST00000426284 444 ntBASIC15.78■□□□□ 0.12
TRAV18A0A075B6X5 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
TRAV18A0A075B6X5 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC15.78■□□□□ 0.12
TRAV18A0A075B6X5 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
TRAV18A0A075B6X5 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC15.78■□□□□ 0.12
TRAV18A0A075B6X5 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC15.78■□□□□ 0.12
TRAV18A0A075B6X5 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC15.78■□□□□ 0.12
TRAV18A0A075B6X5 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC15.78■□□□□ 0.12
TRAV18A0A075B6X5 KLF2-202ENST00000592003 564 ntTSL 3 BASIC15.78■□□□□ 0.12
TRAV18A0A075B6X5 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRAV18A0A075B6X5 AC004264.1-201ENST00000608354 794 ntBASIC15.78■□□□□ 0.12
TRAV18A0A075B6X5 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRAV18A0A075B6X5 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TRAV18A0A075B6X5 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRAV18A0A075B6X5 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRAV18A0A075B6X5 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRAV18A0A075B6X5 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TRAV18A0A075B6X5 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC15.78■□□□□ 0.12
TRAV18A0A075B6X5 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TRAV18A0A075B6X5 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC15.78■□□□□ 0.12
TRAV18A0A075B6X5 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRAV18A0A075B6X5 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TRAV18A0A075B6X5 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC15.78■□□□□ 0.12
TRAV18A0A075B6X5 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC15.78■□□□□ 0.12
TRAV18A0A075B6X5 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TRAV18A0A075B6X5 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
TRAV18A0A075B6X5 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC15.77■□□□□ 0.12
TRAV18A0A075B6X5 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TRAV18A0A075B6X5 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
TRAV18A0A075B6X5 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TRAV18A0A075B6X5 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
TRAV18A0A075B6X5 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
TRAV18A0A075B6X5 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TRAV18A0A075B6X5 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TRAV18A0A075B6X5 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
TRAV18A0A075B6X5 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
TRAV18A0A075B6X5 SLC29A4P1-201ENST00000398760 971 ntBASIC15.77■□□□□ 0.12
TRAV18A0A075B6X5 AC026271.2-201ENST00000428091 497 ntBASIC15.77■□□□□ 0.12
TRAV18A0A075B6X5 Z85996.1-201ENST00000494644 937 ntBASIC15.77■□□□□ 0.12
TRAV18A0A075B6X5 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC15.77■□□□□ 0.12
TRAV18A0A075B6X5 MIR4758-201ENST00000577688 71 ntBASIC15.77■□□□□ 0.12
TRAV18A0A075B6X5 MYC-209ENST00000641252 345 ntBASIC15.77■□□□□ 0.12
TRAV18A0A075B6X5 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
TRAV18A0A075B6X5 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
TRAV18A0A075B6X5 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
TRAV18A0A075B6X5 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
TRAV18A0A075B6X5 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
TRAV18A0A075B6X5 RCC2P3-201ENST00000418112 1537 ntBASIC15.77■□□□□ 0.11
TRAV18A0A075B6X5 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
TRAV18A0A075B6X5 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC15.77■□□□□ 0.11
TRAV18A0A075B6X5 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
TRAV18A0A075B6X5 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
TRAV18A0A075B6X5 AC084018.2-201ENST00000613093 2607 ntBASIC15.77■□□□□ 0.11
TRAV18A0A075B6X5 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
TRAV18A0A075B6X5 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
TRAV18A0A075B6X5 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
TRAV18A0A075B6X5 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC15.77■□□□□ 0.11
TRAV18A0A075B6X5 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
TRAV18A0A075B6X5 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
TRAV18A0A075B6X5 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
TRAV18A0A075B6X5 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC15.76■□□□□ 0.11
TRAV18A0A075B6X5 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC15.76■□□□□ 0.11
TRAV18A0A075B6X5 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRAV18A0A075B6X5 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRAV18A0A075B6X5 HTR7P1-201ENST00000538670 1336 ntBASIC15.76■□□□□ 0.11
TRAV18A0A075B6X5 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TRAV18A0A075B6X5 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC15.76■□□□□ 0.11
TRAV18A0A075B6X5 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRAV18A0A075B6X5 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC15.76■□□□□ 0.11
TRAV18A0A075B6X5 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRAV18A0A075B6X5 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRAV18A0A075B6X5 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC15.76■□□□□ 0.11
TRAV18A0A075B6X5 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
TRAV18A0A075B6X5 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC15.76■□□□□ 0.11
TRAV18A0A075B6X5 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TRAV18A0A075B6X5 CROCCP5-201ENST00000436658 830 ntBASIC15.76■□□□□ 0.11
TRAV18A0A075B6X5 THEM4-205ENST00000489410 643 ntTSL 2 BASIC15.76■□□□□ 0.11
TRAV18A0A075B6X5 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC15.76■□□□□ 0.11
TRAV18A0A075B6X5 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TRAV18A0A075B6X5 ANKRD20A6P-201ENST00000618763 204 ntBASIC15.76■□□□□ 0.11
TRAV18A0A075B6X5 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRAV18A0A075B6X5 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC15.76■□□□□ 0.11
TRAV18A0A075B6X5 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRAV18A0A075B6X5 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
TRAV18A0A075B6X5 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
TRAV18A0A075B6X5 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
TRAV18A0A075B6X5 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC15.76■□□□□ 0.11
TRAV18A0A075B6X5 HLA-DQB1-201ENST00000374943 1656 ntBASIC15.76■□□□□ 0.11
TRAV18A0A075B6X5 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC15.76■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 69.2 ms